Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV12-1A0A0B4J245 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV12-1A0A0B4J245 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV12-1A0A0B4J245 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV12-1A0A0B4J245 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV12-1A0A0B4J245 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV12-1A0A0B4J245 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV12-1A0A0B4J245 DENR-202ENST00000455982 1052 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAV12-1A0A0B4J245 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV12-1A0A0B4J245 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TRAV12-1A0A0B4J245 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
TRAV12-1A0A0B4J245 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV12-1A0A0B4J245 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV12-1A0A0B4J245 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV12-1A0A0B4J245 CLDN5-201ENST00000403084 2357 ntBASIC16.96■□□□□ 0.31
TRAV12-1A0A0B4J245 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV12-1A0A0B4J245 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV12-1A0A0B4J245 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC16.96■□□□□ 0.3
TRAV12-1A0A0B4J245 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC16.96■□□□□ 0.3
TRAV12-1A0A0B4J245 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
TRAV12-1A0A0B4J245 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV12-1A0A0B4J245 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV12-1A0A0B4J245 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV12-1A0A0B4J245 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV12-1A0A0B4J245 WHAMMP2-203ENST00000563942 1603 ntBASIC16.95■□□□□ 0.3
TRAV12-1A0A0B4J245 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV12-1A0A0B4J245 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV12-1A0A0B4J245 AP003733.4-201ENST00000623785 1697 ntBASIC16.94■□□□□ 0.3
TRAV12-1A0A0B4J245 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV12-1A0A0B4J245 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV12-1A0A0B4J245 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV12-1A0A0B4J245 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAV12-1A0A0B4J245 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV12-1A0A0B4J245 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV12-1A0A0B4J245 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV12-1A0A0B4J245 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV12-1A0A0B4J245 DUSP8P5-201ENST00000422884 1815 ntBASIC16.93■□□□□ 0.3
TRAV12-1A0A0B4J245 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV12-1A0A0B4J245 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
TRAV12-1A0A0B4J245 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV12-1A0A0B4J245 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV12-1A0A0B4J245 AC096887.2-201ENST00000623443 1957 ntBASIC16.93■□□□□ 0.3
TRAV12-1A0A0B4J245 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV12-1A0A0B4J245 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV12-1A0A0B4J245 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV12-1A0A0B4J245 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV12-1A0A0B4J245 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV12-1A0A0B4J245 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV12-1A0A0B4J245 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV12-1A0A0B4J245 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TRAV12-1A0A0B4J245 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV12-1A0A0B4J245 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAV12-1A0A0B4J245 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAV12-1A0A0B4J245 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV12-1A0A0B4J245 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV12-1A0A0B4J245 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV12-1A0A0B4J245 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV12-1A0A0B4J245 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV12-1A0A0B4J245 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TRAV12-1A0A0B4J245 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV12-1A0A0B4J245 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV12-1A0A0B4J245 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV12-1A0A0B4J245 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV12-1A0A0B4J245 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV12-1A0A0B4J245 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV12-1A0A0B4J245 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV12-1A0A0B4J245 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV12-1A0A0B4J245 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRAV12-1A0A0B4J245 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAV12-1A0A0B4J245 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV12-1A0A0B4J245 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV12-1A0A0B4J245 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV12-1A0A0B4J245 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC16.89■□□□□ 0.29
TRAV12-1A0A0B4J245 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV12-1A0A0B4J245 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV12-1A0A0B4J245 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV12-1A0A0B4J245 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV12-1A0A0B4J245 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV12-1A0A0B4J245 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV12-1A0A0B4J245 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV12-1A0A0B4J245 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAV12-1A0A0B4J245 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV12-1A0A0B4J245 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV12-1A0A0B4J245 AP002365.1-201ENST00000603448 772 ntBASIC16.88■□□□□ 0.29
TRAV12-1A0A0B4J245 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV12-1A0A0B4J245 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV12-1A0A0B4J245 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV12-1A0A0B4J245 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV12-1A0A0B4J245 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV12-1A0A0B4J245 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRAV12-1A0A0B4J245 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV12-1A0A0B4J245 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV12-1A0A0B4J245 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV12-1A0A0B4J245 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV12-1A0A0B4J245 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV12-1A0A0B4J245 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV12-1A0A0B4J245 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV12-1A0A0B4J245 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV12-1A0A0B4J245 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV12-1A0A0B4J245 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms