Protein–RNA interactions for Protein: A0A075B6T6

TRAV12-2, T-cell receptor alpha variable 12-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-2A0A075B6T6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TRAV12-2A0A075B6T6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV12-2A0A075B6T6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV12-2A0A075B6T6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV12-2A0A075B6T6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC17.88■□□□□ 0.45
TRAV12-2A0A075B6T6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV12-2A0A075B6T6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV12-2A0A075B6T6 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV12-2A0A075B6T6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV12-2A0A075B6T6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV12-2A0A075B6T6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV12-2A0A075B6T6 AC060814.1-201ENST00000554326 538 ntBASIC17.87■□□□□ 0.45
TRAV12-2A0A075B6T6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV12-2A0A075B6T6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV12-2A0A075B6T6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV12-2A0A075B6T6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV12-2A0A075B6T6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV12-2A0A075B6T6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV12-2A0A075B6T6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.86■□□□□ 0.45
TRAV12-2A0A075B6T6 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV12-2A0A075B6T6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV12-2A0A075B6T6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV12-2A0A075B6T6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV12-2A0A075B6T6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAV12-2A0A075B6T6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAV12-2A0A075B6T6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV12-2A0A075B6T6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV12-2A0A075B6T6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV12-2A0A075B6T6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
TRAV12-2A0A075B6T6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV12-2A0A075B6T6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC17.85■□□□□ 0.45
TRAV12-2A0A075B6T6 AC020928.2-201ENST00000588717 2197 ntBASIC17.85■□□□□ 0.45
TRAV12-2A0A075B6T6 AC010501.1-201ENST00000606270 1962 ntBASIC17.85■□□□□ 0.45
TRAV12-2A0A075B6T6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.85■□□□□ 0.45
TRAV12-2A0A075B6T6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV12-2A0A075B6T6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV12-2A0A075B6T6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV12-2A0A075B6T6 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV12-2A0A075B6T6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV12-2A0A075B6T6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV12-2A0A075B6T6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV12-2A0A075B6T6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV12-2A0A075B6T6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV12-2A0A075B6T6 AL157400.5-201ENST00000507624 621 ntBASIC17.84■□□□□ 0.45
TRAV12-2A0A075B6T6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV12-2A0A075B6T6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRAV12-2A0A075B6T6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV12-2A0A075B6T6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV12-2A0A075B6T6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV12-2A0A075B6T6 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV12-2A0A075B6T6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV12-2A0A075B6T6 AC022413.1-201ENST00000624602 984 ntBASIC17.83■□□□□ 0.44
TRAV12-2A0A075B6T6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC17.83■□□□□ 0.44
TRAV12-2A0A075B6T6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV12-2A0A075B6T6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV12-2A0A075B6T6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV12-2A0A075B6T6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV12-2A0A075B6T6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV12-2A0A075B6T6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV12-2A0A075B6T6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TRAV12-2A0A075B6T6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TRAV12-2A0A075B6T6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV12-2A0A075B6T6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRAV12-2A0A075B6T6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV12-2A0A075B6T6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC17.82■□□□□ 0.44
TRAV12-2A0A075B6T6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV12-2A0A075B6T6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV12-2A0A075B6T6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV12-2A0A075B6T6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV12-2A0A075B6T6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAV12-2A0A075B6T6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV12-2A0A075B6T6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV12-2A0A075B6T6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV12-2A0A075B6T6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV12-2A0A075B6T6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC17.81■□□□□ 0.44
TRAV12-2A0A075B6T6 MIR4449-201ENST00000578365 66 ntBASIC17.81■□□□□ 0.44
TRAV12-2A0A075B6T6 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRAV12-2A0A075B6T6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV12-2A0A075B6T6 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRAV12-2A0A075B6T6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV12-2A0A075B6T6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV12-2A0A075B6T6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV12-2A0A075B6T6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
TRAV12-2A0A075B6T6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV12-2A0A075B6T6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC17.8■□□□□ 0.44
TRAV12-2A0A075B6T6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV12-2A0A075B6T6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV12-2A0A075B6T6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV12-2A0A075B6T6 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV12-2A0A075B6T6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRAV12-2A0A075B6T6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAV12-2A0A075B6T6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAV12-2A0A075B6T6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV12-2A0A075B6T6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV12-2A0A075B6T6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV12-2A0A075B6T6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV12-2A0A075B6T6 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV12-2A0A075B6T6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV12-2A0A075B6T6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TRAV12-2A0A075B6T6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms