Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 AC109635.5-201ENST00000533593 962 ntBASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 LINC02560-201ENST00000596379 459 ntBASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 AL158211.3-201ENST00000607385 239 ntBASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 AC008761.3-201ENST00000624803 892 ntBASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC2Q9Y5Z7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC2Q9Y5Z7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 MIR6080-201ENST00000617359 66 ntBASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 LYSMD4-203ENST00000378904 2122 ntBASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.87■□□□□ 0.45
HCFC2Q9Y5Z7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms