Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 AC112698.1-201ENST00000510299 916 ntBASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 AC139887.4-201ENST00000607877 719 ntBASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB4Q9UN71 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
PCDHGB4Q9UN71 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB4Q9UN71 KRT8P47-201ENST00000604727 1398 ntBASIC16.77■□□□□ 0.28
PCDHGB4Q9UN71 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB4Q9UN71 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.77■□□□□ 0.28
PCDHGB4Q9UN71 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB4Q9UN71 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB4Q9UN71 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB4Q9UN71 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB4Q9UN71 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB4Q9UN71 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB4Q9UN71 REXO1L11P-201ENST00000620964 1927 ntBASIC16.77■□□□□ 0.28
PCDHGB4Q9UN71 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB4Q9UN71 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB4Q9UN71 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHGB4Q9UN71 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PCDHGB4Q9UN71 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB4Q9UN71 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB4Q9UN71 YBX1P2-201ENST00000489612 999 ntBASIC16.77■□□□□ 0.28
PCDHGB4Q9UN71 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB4Q9UN71 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PCDHGB4Q9UN71 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGB4Q9UN71 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PCDHGB4Q9UN71 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHGB4Q9UN71 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB4Q9UN71 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGB4Q9UN71 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGB4Q9UN71 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.77■□□□□ 0.27
PCDHGB4Q9UN71 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGB4Q9UN71 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGB4Q9UN71 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGB4Q9UN71 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGB4Q9UN71 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGB4Q9UN71 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGB4Q9UN71 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
PCDHGB4Q9UN71 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.77■□□□□ 0.27
PCDHGB4Q9UN71 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
PCDHGB4Q9UN71 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDHGB4Q9UN71 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 AC060834.1-201ENST00000443027 2032 ntBASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 SPDYE15P-201ENST00000424157 909 ntBASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 HOMER2P1-201ENST00000455653 964 ntBASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 AL353692.3-201ENST00000407031 1396 ntBASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PCDHGB4Q9UN71 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms