Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 RPL13AP23-201ENST00000480739 586 ntBASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 AC108751.1-201ENST00000490852 363 ntBASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 Z83851.2-201ENST00000609564 659 ntBASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TRAM1L1Q8N609 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAM1L1Q8N609 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRAM1L1Q8N609 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17■□□□□ 0.31
TRAM1L1Q8N609 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRAM1L1Q8N609 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAM1L1Q8N609 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRAM1L1Q8N609 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAM1L1Q8N609 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRAM1L1Q8N609 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRAM1L1Q8N609 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRAM1L1Q8N609 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAM1L1Q8N609 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
TRAM1L1Q8N609 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAM1L1Q8N609 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17■□□□□ 0.31
TRAM1L1Q8N609 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17■□□□□ 0.31
TRAM1L1Q8N609 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17■□□□□ 0.31
TRAM1L1Q8N609 AC108073.2-201ENST00000464002 357 ntBASIC17■□□□□ 0.31
TRAM1L1Q8N609 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAM1L1Q8N609 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17■□□□□ 0.31
TRAM1L1Q8N609 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17■□□□□ 0.31
TRAM1L1Q8N609 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17■□□□□ 0.31
TRAM1L1Q8N609 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRAM1L1Q8N609 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TRAM1L1Q8N609 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
TRAM1L1Q8N609 CEP83-AS1-201ENST00000623122 2482 ntBASIC17■□□□□ 0.31
TRAM1L1Q8N609 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAM1L1Q8N609 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAM1L1Q8N609 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17■□□□□ 0.31
TRAM1L1Q8N609 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAM1L1Q8N609 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAM1L1Q8N609 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRAM1L1Q8N609 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17■□□□□ 0.31
TRAM1L1Q8N609 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRAM1L1Q8N609 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAM1L1Q8N609 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17■□□□□ 0.31
TRAM1L1Q8N609 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAM1L1Q8N609 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17■□□□□ 0.31
TRAM1L1Q8N609 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 AC104109.2-201ENST00000602919 1418 ntBASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 SLC25A1P1-201ENST00000528351 927 ntBASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 AC124947.2-201ENST00000547118 1133 ntBASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 ZNF259P1-201ENST00000407656 1365 ntBASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAM1L1Q8N609 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms