Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HLA-BQ31612 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.63■□□□□ 0.25
HLA-BQ31612 SLC25A39P2-201ENST00000537614 270 ntBASIC16.63■□□□□ 0.25
HLA-BQ31612 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.63■□□□□ 0.25
HLA-BQ31612 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.63■□□□□ 0.25
HLA-BQ31612 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.63■□□□□ 0.25
HLA-BQ31612 AL390754.1-201ENST00000619088 582 ntBASIC16.63■□□□□ 0.25
HLA-BQ31612 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-BQ31612 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HLA-BQ31612 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-BQ31612 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-BQ31612 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-BQ31612 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.63■□□□□ 0.25
HLA-BQ31612 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HLA-BQ31612 AL138781.2-201ENST00000617896 1843 ntBASIC16.63■□□□□ 0.25
HLA-BQ31612 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
HLA-BQ31612 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-BQ31612 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.63■□□□□ 0.25
HLA-BQ31612 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-BQ31612 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-BQ31612 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-BQ31612 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HLA-BQ31612 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-BQ31612 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.62■□□□□ 0.25
HLA-BQ31612 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.62■□□□□ 0.25
HLA-BQ31612 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.62■□□□□ 0.25
HLA-BQ31612 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.62■□□□□ 0.25
HLA-BQ31612 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-BQ31612 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-BQ31612 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-BQ31612 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-BQ31612 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-BQ31612 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-BQ31612 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.62■□□□□ 0.25
HLA-BQ31612 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.62■□□□□ 0.25
HLA-BQ31612 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.62■□□□□ 0.25
HLA-BQ31612 SPDYE14P-201ENST00000442619 822 ntBASIC16.62■□□□□ 0.25
HLA-BQ31612 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.62■□□□□ 0.25
HLA-BQ31612 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.62■□□□□ 0.25
HLA-BQ31612 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HLA-BQ31612 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-BQ31612 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.62■□□□□ 0.25
HLA-BQ31612 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.62■□□□□ 0.25
HLA-BQ31612 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.62■□□□□ 0.25
HLA-BQ31612 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.62■□□□□ 0.25
HLA-BQ31612 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HLA-BQ31612 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-BQ31612 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-BQ31612 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-BQ31612 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
HLA-BQ31612 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HLA-BQ31612 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-BQ31612 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-BQ31612 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-BQ31612 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-BQ31612 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.62■□□□□ 0.25
HLA-BQ31612 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-BQ31612 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-BQ31612 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.62■□□□□ 0.25
HLA-BQ31612 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-BQ31612 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-BQ31612 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-BQ31612 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-BQ31612 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-BQ31612 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-BQ31612 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-BQ31612 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-BQ31612 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-BQ31612 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HLA-BQ31612 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-BQ31612 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-BQ31612 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
HLA-BQ31612 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-BQ31612 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-BQ31612 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-BQ31612 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-BQ31612 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-BQ31612 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-BQ31612 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
HLA-BQ31612 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-BQ31612 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-BQ31612 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-BQ31612 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-BQ31612 AL512638.1-201ENST00000457493 794 ntBASIC16.61■□□□□ 0.25
HLA-BQ31612 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-BQ31612 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-BQ31612 LINC02560-201ENST00000596379 459 ntBASIC16.61■□□□□ 0.25
HLA-BQ31612 AC012645.4-201ENST00000610691 1061 ntBASIC16.61■□□□□ 0.25
HLA-BQ31612 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-BQ31612 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
HLA-BQ31612 AC084121.4-201ENST00000641598 221 ntBASIC16.61■□□□□ 0.25
HLA-BQ31612 AF228730.8-201ENST00000642140 221 ntBASIC16.61■□□□□ 0.25
HLA-BQ31612 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-BQ31612 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-BQ31612 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-BQ31612 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-BQ31612 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HLA-BQ31612 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HLA-BQ31612 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-BQ31612 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms