Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCL1P09341 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.41□□□□□ -0.26
CXCL1P09341 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCL1P09341 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.41□□□□□ -0.26
CXCL1P09341 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCL1P09341 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCL1P09341 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCL1P09341 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.41□□□□□ -0.26
CXCL1P09341 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCL1P09341 AC092053.1-201ENST00000605787 1936 ntBASIC13.41□□□□□ -0.26
CXCL1P09341 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCL1P09341 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.41□□□□□ -0.26
CXCL1P09341 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCL1P09341 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CXCL1P09341 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCL1P09341 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CXCL1P09341 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CXCL1P09341 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCL1P09341 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCL1P09341 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCL1P09341 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCL1P09341 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCL1P09341 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CXCL1P09341 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CXCL1P09341 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CXCL1P09341 AC026366.1-201ENST00000488803 879 ntBASIC13.41□□□□□ -0.26
CXCL1P09341 LY6E-205ENST00000519611 635 ntTSL 3 BASIC13.41□□□□□ -0.26
CXCL1P09341 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
CXCL1P09341 AC009065.1-201ENST00000564055 1225 ntBASIC13.41□□□□□ -0.26
CXCL1P09341 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CXCL1P09341 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.41□□□□□ -0.26
CXCL1P09341 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC13.41□□□□□ -0.26
CXCL1P09341 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CXCL1P09341 ABBA01031674.1-201ENST00000635145 728 ntBASIC13.41□□□□□ -0.26
CXCL1P09341 AL023875.1-201ENST00000640777 796 ntBASIC13.41□□□□□ -0.26
CXCL1P09341 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CXCL1P09341 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCL1P09341 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CXCL1P09341 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CXCL1P09341 C8orf49-201ENST00000525043 1968 ntBASIC13.41□□□□□ -0.26
CXCL1P09341 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.41□□□□□ -0.26
CXCL1P09341 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCL1P09341 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCL1P09341 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CXCL1P09341 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCL1P09341 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.41□□□□□ -0.26
CXCL1P09341 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.41□□□□□ -0.26
CXCL1P09341 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CXCL1P09341 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.41□□□□□ -0.26
CXCL1P09341 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCL1P09341 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CXCL1P09341 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CXCL1P09341 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CXCL1P09341 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.4□□□□□ -0.26
CXCL1P09341 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CXCL1P09341 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCL1P09341 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCL1P09341 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CXCL1P09341 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CXCL1P09341 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.4□□□□□ -0.26
CXCL1P09341 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCL1P09341 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.4□□□□□ -0.26
CXCL1P09341 AL163051.1-201ENST00000569214 1512 ntBASIC13.4□□□□□ -0.26
CXCL1P09341 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CXCL1P09341 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.4□□□□□ -0.26
CXCL1P09341 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCL1P09341 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CXCL1P09341 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CXCL1P09341 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCL1P09341 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CXCL1P09341 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCL1P09341 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CXCL1P09341 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC13.4□□□□□ -0.26
CXCL1P09341 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CXCL1P09341 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC13.4□□□□□ -0.26
CXCL1P09341 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCL1P09341 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCL1P09341 AC124016.1-201ENST00000609552 612 ntBASIC13.4□□□□□ -0.26
CXCL1P09341 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCL1P09341 AL109923.1-201ENST00000618799 583 ntBASIC13.4□□□□□ -0.26
CXCL1P09341 AC130371.2-201ENST00000619443 611 ntBASIC13.4□□□□□ -0.26
CXCL1P09341 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCL1P09341 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CXCL1P09341 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.4□□□□□ -0.26
CXCL1P09341 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.4□□□□□ -0.26
CXCL1P09341 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CXCL1P09341 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCL1P09341 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCL1P09341 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CXCL1P09341 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.4□□□□□ -0.26
CXCL1P09341 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.4□□□□□ -0.26
CXCL1P09341 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CXCL1P09341 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.4□□□□□ -0.26
CXCL1P09341 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CXCL1P09341 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CXCL1P09341 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CXCL1P09341 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CXCL1P09341 KRT8P7-201ENST00000533003 1432 ntBASIC13.39□□□□□ -0.27
CXCL1P09341 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CXCL1P09341 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms