Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD48P09326 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CD48P09326 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.87■□□□□ 0.45
CD48P09326 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.87■□□□□ 0.45
CD48P09326 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.87■□□□□ 0.45
CD48P09326 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CD48P09326 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CD48P09326 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CD48P09326 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CD48P09326 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CD48P09326 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CD48P09326 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.86■□□□□ 0.45
CD48P09326 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CD48P09326 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CD48P09326 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CD48P09326 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.86■□□□□ 0.45
CD48P09326 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CD48P09326 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CD48P09326 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CD48P09326 TSPY19P-201ENST00000418461 509 ntBASIC17.86■□□□□ 0.45
CD48P09326 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CD48P09326 TSPY18P-201ENST00000441642 509 ntBASIC17.86■□□□□ 0.45
CD48P09326 AC106795.1-205ENST00000512851 1056 ntBASIC17.86■□□□□ 0.45
CD48P09326 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CD48P09326 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CD48P09326 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.86■□□□□ 0.45
CD48P09326 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.86■□□□□ 0.45
CD48P09326 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CD48P09326 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CD48P09326 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CD48P09326 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.86■□□□□ 0.45
CD48P09326 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CD48P09326 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CD48P09326 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.86■□□□□ 0.45
CD48P09326 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
CD48P09326 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CD48P09326 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CD48P09326 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CD48P09326 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.86■□□□□ 0.45
CD48P09326 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CD48P09326 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CD48P09326 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CD48P09326 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CD48P09326 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CD48P09326 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
CD48P09326 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.86■□□□□ 0.45
CD48P09326 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CD48P09326 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CD48P09326 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CD48P09326 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CD48P09326 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CD48P09326 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.85■□□□□ 0.45
CD48P09326 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CD48P09326 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CD48P09326 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CD48P09326 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.85■□□□□ 0.45
CD48P09326 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CD48P09326 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CD48P09326 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CD48P09326 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
CD48P09326 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CD48P09326 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CD48P09326 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.85■□□□□ 0.45
CD48P09326 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CD48P09326 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.85■□□□□ 0.45
CD48P09326 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
CD48P09326 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CD48P09326 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.85■□□□□ 0.45
CD48P09326 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CD48P09326 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.85■□□□□ 0.45
CD48P09326 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CD48P09326 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.84■□□□□ 0.45
CD48P09326 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CD48P09326 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.84■□□□□ 0.45
CD48P09326 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CD48P09326 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.84■□□□□ 0.45
CD48P09326 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CD48P09326 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CD48P09326 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CD48P09326 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.84■□□□□ 0.45
CD48P09326 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CD48P09326 GPR89P-201ENST00000407924 1495 ntBASIC17.84■□□□□ 0.45
CD48P09326 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.84■□□□□ 0.45
CD48P09326 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CD48P09326 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CD48P09326 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CD48P09326 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CD48P09326 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CD48P09326 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.84■□□□□ 0.45
CD48P09326 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
CD48P09326 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CD48P09326 LINC00982-205ENST00000420957 435 ntBASIC17.84■□□□□ 0.45
CD48P09326 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.84■□□□□ 0.45
CD48P09326 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CD48P09326 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CD48P09326 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.84■□□□□ 0.45
CD48P09326 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.84■□□□□ 0.45
CD48P09326 AC124947.2-201ENST00000547118 1133 ntBASIC17.84■□□□□ 0.45
CD48P09326 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.84■□□□□ 0.45
CD48P09326 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms