Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RETP07949 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.38■□□□□ 0.37
RETP07949 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RETP07949 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RETP07949 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RETP07949 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
RETP07949 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RETP07949 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.38■□□□□ 0.37
RETP07949 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RETP07949 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RETP07949 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.38■□□□□ 0.37
RETP07949 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RETP07949 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.38■□□□□ 0.37
RETP07949 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.38■□□□□ 0.37
RETP07949 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.38■□□□□ 0.37
RETP07949 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.38■□□□□ 0.37
RETP07949 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.38■□□□□ 0.37
RETP07949 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.38■□□□□ 0.37
RETP07949 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.38■□□□□ 0.37
RETP07949 INGX-202ENST00000489074 768 ntBASIC17.38■□□□□ 0.37
RETP07949 AC015911.4-201ENST00000588022 1070 ntBASIC17.38■□□□□ 0.37
RETP07949 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.38■□□□□ 0.37
RETP07949 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
RETP07949 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RETP07949 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RETP07949 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.38■□□□□ 0.37
RETP07949 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
RETP07949 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RETP07949 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RETP07949 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RETP07949 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RETP07949 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RETP07949 SIRPAP1-201ENST00000448467 1770 ntBASIC17.38■□□□□ 0.37
RETP07949 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RETP07949 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RETP07949 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RETP07949 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RETP07949 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.37■□□□□ 0.37
RETP07949 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RETP07949 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RETP07949 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RETP07949 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RETP07949 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RETP07949 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
RETP07949 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.37■□□□□ 0.37
RETP07949 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
RETP07949 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RETP07949 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.37■□□□□ 0.37
RETP07949 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RETP07949 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RETP07949 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RETP07949 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
RETP07949 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.37■□□□□ 0.37
RETP07949 SIGLEC30P-201ENST00000455569 941 ntBASIC17.37■□□□□ 0.37
RETP07949 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.37■□□□□ 0.37
RETP07949 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.37■□□□□ 0.37
RETP07949 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.37■□□□□ 0.37
RETP07949 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.37■□□□□ 0.37
RETP07949 AC093214.1-201ENST00000511688 1107 ntBASIC17.37■□□□□ 0.37
RETP07949 AC005225.4-201ENST00000557330 545 ntBASIC17.37■□□□□ 0.37
RETP07949 AC087641.1-201ENST00000557561 1021 ntBASIC17.37■□□□□ 0.37
RETP07949 AC093520.2-201ENST00000561830 333 ntBASIC17.37■□□□□ 0.37
RETP07949 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.37■□□□□ 0.37
RETP07949 AC022145.2-201ENST00000598203 171 ntBASIC17.37■□□□□ 0.37
RETP07949 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.37■□□□□ 0.37
RETP07949 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.37■□□□□ 0.37
RETP07949 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RETP07949 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RETP07949 PRORSD1P-202ENST00000563365 2154 ntBASIC17.37■□□□□ 0.37
RETP07949 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
RETP07949 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RETP07949 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RETP07949 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.37■□□□□ 0.37
RETP07949 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RETP07949 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RETP07949 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RETP07949 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RETP07949 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RETP07949 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RETP07949 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RETP07949 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
RETP07949 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
RETP07949 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RETP07949 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RETP07949 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RETP07949 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RETP07949 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RETP07949 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RETP07949 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RETP07949 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RETP07949 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RETP07949 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RETP07949 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RETP07949 COX5BP2-201ENST00000392354 334 ntBASIC17.36■□□□□ 0.37
RETP07949 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.36■□□□□ 0.37
RETP07949 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.36■□□□□ 0.37
RETP07949 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.36■□□□□ 0.37
RETP07949 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.36■□□□□ 0.37
RETP07949 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RETP07949 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms