Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TRGV3P03979 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV3P03979 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV3P03979 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV3P03979 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV3P03979 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV3P03979 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
TRGV3P03979 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV3P03979 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV3P03979 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV3P03979 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV3P03979 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV3P03979 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV3P03979 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV3P03979 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.6□□□□□ -0.23
TRGV3P03979 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV3P03979 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV3P03979 SPDYE21P-201ENST00000413323 827 ntBASIC13.6□□□□□ -0.23
TRGV3P03979 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV3P03979 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV3P03979 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.6□□□□□ -0.23
TRGV3P03979 EMBP1-201ENST00000458200 901 ntBASIC13.6□□□□□ -0.23
TRGV3P03979 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
TRGV3P03979 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.6□□□□□ -0.23
TRGV3P03979 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.6□□□□□ -0.23
TRGV3P03979 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.6□□□□□ -0.23
TRGV3P03979 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.6□□□□□ -0.23
TRGV3P03979 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.6□□□□□ -0.23
TRGV3P03979 RN7SL510P-201ENST00000581311 263 ntBASIC13.6□□□□□ -0.23
TRGV3P03979 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.6□□□□□ -0.23
TRGV3P03979 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.6□□□□□ -0.23
TRGV3P03979 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRGV3P03979 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV3P03979 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV3P03979 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV3P03979 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV3P03979 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRGV3P03979 AC079776.2-201ENST00000641154 1609 ntBASIC13.6□□□□□ -0.23
TRGV3P03979 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV3P03979 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV3P03979 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV3P03979 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.6□□□□□ -0.23
TRGV3P03979 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.6□□□□□ -0.23
TRGV3P03979 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV3P03979 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13.59□□□□□ -0.23
TRGV3P03979 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.59□□□□□ -0.23
TRGV3P03979 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC13.59□□□□□ -0.23
TRGV3P03979 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TRGV3P03979 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.59□□□□□ -0.23
TRGV3P03979 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV3P03979 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV3P03979 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV3P03979 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV3P03979 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV3P03979 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TRGV3P03979 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV3P03979 AKR1C7P-201ENST00000305623 895 ntBASIC13.59□□□□□ -0.23
TRGV3P03979 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV3P03979 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV3P03979 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.59□□□□□ -0.23
TRGV3P03979 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
TRGV3P03979 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.59□□□□□ -0.23
TRGV3P03979 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV3P03979 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.59□□□□□ -0.23
TRGV3P03979 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV3P03979 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.59□□□□□ -0.23
TRGV3P03979 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
TRGV3P03979 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.59□□□□□ -0.23
TRGV3P03979 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.59□□□□□ -0.23
TRGV3P03979 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV3P03979 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TRGV3P03979 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.59□□□□□ -0.23
TRGV3P03979 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
TRGV3P03979 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.59□□□□□ -0.23
TRGV3P03979 AL139288.1-201ENST00000623748 933 ntBASIC13.59□□□□□ -0.23
TRGV3P03979 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.59□□□□□ -0.23
TRGV3P03979 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TRGV3P03979 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV3P03979 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV3P03979 FLJ16779-201ENST00000612722 7638 ntBASIC13.59□□□□□ -0.23
TRGV3P03979 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.59□□□□□ -0.23
TRGV3P03979 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV3P03979 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV3P03979 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV3P03979 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.59□□□□□ -0.23
TRGV3P03979 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV3P03979 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TRGV3P03979 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC13.59□□□□□ -0.23
TRGV3P03979 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV3P03979 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV3P03979 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TRGV3P03979 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRGV3P03979 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TRGV3P03979 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV3P03979 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV3P03979 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
TRGV3P03979 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.58□□□□□ -0.24
TRGV3P03979 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRGV3P03979 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC13.58□□□□□ -0.24
TRGV3P03979 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms