Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM3O75382 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM3O75382 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM3O75382 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRIM3O75382 DDX43P3-201ENST00000441064 443 ntBASIC16.14■□□□□ 0.17
TRIM3O75382 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM3O75382 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM3O75382 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRIM3O75382 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM3O75382 AC008608.2-201ENST00000606089 416 ntBASIC16.14■□□□□ 0.17
TRIM3O75382 AL355877.3-201ENST00000622820 899 ntBASIC16.14■□□□□ 0.17
TRIM3O75382 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRIM3O75382 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
TRIM3O75382 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM3O75382 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM3O75382 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM3O75382 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM3O75382 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM3O75382 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TRIM3O75382 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
TRIM3O75382 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRIM3O75382 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM3O75382 AC011676.5-201ENST00000624864 2660 ntBASIC16.13■□□□□ 0.17
TRIM3O75382 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM3O75382 AC006116.8-202ENST00000587620 1550 ntBASIC16.13■□□□□ 0.17
TRIM3O75382 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM3O75382 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM3O75382 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM3O75382 AP005117.1-201ENST00000584346 1413 ntBASIC16.13■□□□□ 0.17
TRIM3O75382 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TRIM3O75382 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TRIM3O75382 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM3O75382 AC009949.1-201ENST00000623048 1830 ntBASIC16.13■□□□□ 0.17
TRIM3O75382 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM3O75382 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM3O75382 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM3O75382 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM3O75382 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM3O75382 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM3O75382 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
TRIM3O75382 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM3O75382 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM3O75382 FDX1P1-201ENST00000449115 551 ntBASIC16.13■□□□□ 0.17
TRIM3O75382 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM3O75382 AP002469.2-201ENST00000531724 424 ntBASIC16.13■□□□□ 0.17
TRIM3O75382 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.13■□□□□ 0.17
TRIM3O75382 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM3O75382 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM3O75382 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRIM3O75382 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM3O75382 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
TRIM3O75382 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM3O75382 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM3O75382 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM3O75382 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM3O75382 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM3O75382 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM3O75382 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM3O75382 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
TRIM3O75382 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
TRIM3O75382 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRIM3O75382 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRIM3O75382 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM3O75382 KRT8P10-201ENST00000450021 1447 ntBASIC16.12■□□□□ 0.17
TRIM3O75382 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM3O75382 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM3O75382 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM3O75382 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM3O75382 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM3O75382 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM3O75382 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM3O75382 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM3O75382 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM3O75382 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM3O75382 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM3O75382 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM3O75382 AC103564.2-201ENST00000432853 1299 ntBASIC16.12■□□□□ 0.17
TRIM3O75382 FGFR3P6-201ENST00000457012 610 ntBASIC16.12■□□□□ 0.17
TRIM3O75382 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM3O75382 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.12■□□□□ 0.17
TRIM3O75382 MTDHP3-201ENST00000594186 672 ntBASIC16.12■□□□□ 0.17
TRIM3O75382 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRIM3O75382 AP000867.4-201ENST00000641616 219 ntBASIC16.12■□□□□ 0.17
TRIM3O75382 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM3O75382 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM3O75382 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRIM3O75382 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM3O75382 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM3O75382 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM3O75382 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM3O75382 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM3O75382 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM3O75382 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
TRIM3O75382 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TRIM3O75382 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM3O75382 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM3O75382 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM3O75382 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRIM3O75382 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM3O75382 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms