Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH16O75309 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH16O75309 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH16O75309 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
CDH16O75309 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH16O75309 ECEL1P2-202ENST00000465689 757 ntBASIC17.46■□□□□ 0.39
CDH16O75309 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDH16O75309 AC068472.1-201ENST00000474589 881 ntBASIC17.46■□□□□ 0.39
CDH16O75309 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.46■□□□□ 0.39
CDH16O75309 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.46■□□□□ 0.39
CDH16O75309 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDH16O75309 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.46■□□□□ 0.39
CDH16O75309 AC145285.6-201ENST00000604632 637 ntBASIC17.46■□□□□ 0.39
CDH16O75309 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.46■□□□□ 0.39
CDH16O75309 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.46■□□□□ 0.39
CDH16O75309 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CDH16O75309 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.46■□□□□ 0.39
CDH16O75309 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH16O75309 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH16O75309 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH16O75309 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH16O75309 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
CDH16O75309 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH16O75309 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
CDH16O75309 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.38
CDH16O75309 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CDH16O75309 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDH16O75309 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CDH16O75309 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH16O75309 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH16O75309 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH16O75309 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH16O75309 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH16O75309 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CDH16O75309 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.45■□□□□ 0.38
CDH16O75309 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH16O75309 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH16O75309 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH16O75309 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH16O75309 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH16O75309 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH16O75309 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH16O75309 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH16O75309 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH16O75309 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.45■□□□□ 0.38
CDH16O75309 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH16O75309 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH16O75309 AC133561.5-201ENST00000635547 218 ntBASIC17.45■□□□□ 0.38
CDH16O75309 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH16O75309 AC007950.2-201ENST00000615045 2347 ntBASIC17.45■□□□□ 0.38
CDH16O75309 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH16O75309 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH16O75309 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.45■□□□□ 0.38
CDH16O75309 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH16O75309 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH16O75309 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH16O75309 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH16O75309 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CDH16O75309 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH16O75309 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH16O75309 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH16O75309 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH16O75309 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH16O75309 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH16O75309 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH16O75309 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.44■□□□□ 0.38
CDH16O75309 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CDH16O75309 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH16O75309 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
CDH16O75309 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH16O75309 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH16O75309 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 IGHGP-201ENST00000390555 1178 ntBASIC17.44■□□□□ 0.38
CDH16O75309 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH16O75309 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 AC211429.1-201ENST00000415277 523 ntBASIC17.44■□□□□ 0.38
CDH16O75309 HLA-F-220ENST00000434407 884 ntBASIC17.44■□□□□ 0.38
CDH16O75309 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.44■□□□□ 0.38
CDH16O75309 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.44■□□□□ 0.38
CDH16O75309 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CDH16O75309 AC019129.2-201ENST00000609837 1235 ntBASIC17.44■□□□□ 0.38
CDH16O75309 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH16O75309 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH16O75309 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms