Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NFKBIEO00221 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC20.55■□□□□ 0.88
NFKBIEO00221 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NFKBIEO00221 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.55■□□□□ 0.88
NFKBIEO00221 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.55■□□□□ 0.88
NFKBIEO00221 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
NFKBIEO00221 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
NFKBIEO00221 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
NFKBIEO00221 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NFKBIEO00221 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC20.55■□□□□ 0.88
NFKBIEO00221 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NFKBIEO00221 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.55■□□□□ 0.88
NFKBIEO00221 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.55■□□□□ 0.88
NFKBIEO00221 RPL37AP1-201ENST00000412502 279 ntBASIC20.55■□□□□ 0.88
NFKBIEO00221 AP006294.1-201ENST00000415407 339 ntBASIC20.55■□□□□ 0.88
NFKBIEO00221 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC20.55■□□□□ 0.88
NFKBIEO00221 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC20.55■□□□□ 0.88
NFKBIEO00221 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NFKBIEO00221 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.55■□□□□ 0.88
NFKBIEO00221 KRT17P8-201ENST00000540749 863 ntBASIC20.55■□□□□ 0.88
NFKBIEO00221 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NFKBIEO00221 AC106886.1-201ENST00000568660 600 ntBASIC20.55■□□□□ 0.88
NFKBIEO00221 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC20.55■□□□□ 0.88
NFKBIEO00221 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NFKBIEO00221 AC084346.2-201ENST00000607097 949 ntBASIC20.55■□□□□ 0.88
NFKBIEO00221 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC20.55■□□□□ 0.88
NFKBIEO00221 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
NFKBIEO00221 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NFKBIEO00221 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NFKBIEO00221 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NFKBIEO00221 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NFKBIEO00221 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.55■□□□□ 0.88
NFKBIEO00221 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NFKBIEO00221 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NFKBIEO00221 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NFKBIEO00221 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.54■□□□□ 0.88
NFKBIEO00221 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
NFKBIEO00221 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.54■□□□□ 0.88
NFKBIEO00221 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NFKBIEO00221 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
NFKBIEO00221 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NFKBIEO00221 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NFKBIEO00221 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
NFKBIEO00221 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NFKBIEO00221 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.54■□□□□ 0.88
NFKBIEO00221 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NFKBIEO00221 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NFKBIEO00221 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
NFKBIEO00221 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
NFKBIEO00221 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NFKBIEO00221 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC20.54■□□□□ 0.88
NFKBIEO00221 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.54■□□□□ 0.88
NFKBIEO00221 AC022210.1-201ENST00000449856 793 ntBASIC20.54■□□□□ 0.88
NFKBIEO00221 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC20.54■□□□□ 0.88
NFKBIEO00221 AC092658.1-201ENST00000505836 891 ntBASIC20.54■□□□□ 0.88
NFKBIEO00221 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC20.54■□□□□ 0.88
NFKBIEO00221 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC20.54■□□□□ 0.88
NFKBIEO00221 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC20.54■□□□□ 0.88
NFKBIEO00221 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC20.54■□□□□ 0.88
NFKBIEO00221 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NFKBIEO00221 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.54■□□□□ 0.88
NFKBIEO00221 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
NFKBIEO00221 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
NFKBIEO00221 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NFKBIEO00221 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NFKBIEO00221 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.54■□□□□ 0.88
NFKBIEO00221 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.54■□□□□ 0.88
NFKBIEO00221 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NFKBIEO00221 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.54■□□□□ 0.88
NFKBIEO00221 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NFKBIEO00221 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.54■□□□□ 0.88
NFKBIEO00221 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NFKBIEO00221 WIZP1-201ENST00000531444 2299 ntBASIC20.53■□□□□ 0.88
NFKBIEO00221 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NFKBIEO00221 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NFKBIEO00221 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.53■□□□□ 0.88
NFKBIEO00221 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NFKBIEO00221 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
NFKBIEO00221 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
NFKBIEO00221 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NFKBIEO00221 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NFKBIEO00221 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.53■□□□□ 0.88
NFKBIEO00221 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NFKBIEO00221 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NFKBIEO00221 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NFKBIEO00221 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC20.53■□□□□ 0.88
NFKBIEO00221 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NFKBIEO00221 DFFBP1-201ENST00000433250 979 ntBASIC20.53■□□□□ 0.88
NFKBIEO00221 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NFKBIEO00221 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
NFKBIEO00221 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.53■□□□□ 0.88
NFKBIEO00221 AC091167.2-201ENST00000579581 588 ntBASIC20.53■□□□□ 0.88
NFKBIEO00221 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC20.53■□□□□ 0.88
NFKBIEO00221 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NFKBIEO00221 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NFKBIEO00221 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NFKBIEO00221 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.53■□□□□ 0.88
NFKBIEO00221 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NFKBIEO00221 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NFKBIEO00221 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms