Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC069262.1-201ENST00000539058 672 ntBASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 AC090340.1-201ENST00000620778 4980 ntBASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC187A0A096LP49 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 AKAP8P1-201ENST00000434743 1349 ntBASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 AC069335.1-201ENST00000489972 472 ntBASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 AC107918.2-201ENST00000530817 355 ntBASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 RARRES2P8-201ENST00000566335 367 ntBASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 MIR4515-201ENST00000584082 81 ntBASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 AC138761.1-201ENST00000584393 385 ntBASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC187A0A096LP49 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC187A0A096LP49 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC187A0A096LP49 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.27■□□□□ 0.19
CCDC187A0A096LP49 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.27■□□□□ 0.19
CCDC187A0A096LP49 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC187A0A096LP49 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 DUX4L27-201ENST00000554796 1261 ntBASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 AL135744.1-201ENST00000565098 629 ntBASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 AL161645.1-201ENST00000622716 1255 ntBASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms