Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 LINC00896-202ENST00000609602 2128 ntBASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBQLN1Q9UMX0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.46■□□□□ 0.55
UBQLN1Q9UMX0 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
UBQLN1Q9UMX0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN1Q9UMX0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
UBQLN1Q9UMX0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.46■□□□□ 0.55
UBQLN1Q9UMX0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN1Q9UMX0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN1Q9UMX0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
UBQLN1Q9UMX0 BX842568.4-201ENST00000421222 227 ntBASIC18.46■□□□□ 0.55
UBQLN1Q9UMX0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN1Q9UMX0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.46■□□□□ 0.55
UBQLN1Q9UMX0 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.46■□□□□ 0.55
UBQLN1Q9UMX0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.46■□□□□ 0.55
UBQLN1Q9UMX0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN1Q9UMX0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN1Q9UMX0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN1Q9UMX0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN1Q9UMX0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN1Q9UMX0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.46■□□□□ 0.55
UBQLN1Q9UMX0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN1Q9UMX0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.46■□□□□ 0.55
UBQLN1Q9UMX0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
UBQLN1Q9UMX0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
UBQLN1Q9UMX0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.46■□□□□ 0.54
UBQLN1Q9UMX0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
UBQLN1Q9UMX0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 SLC25A6P2-201ENST00000497974 877 ntBASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 AC096734.2-201ENST00000562054 433 ntBASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 AC002347.1-201ENST00000569543 541 ntBASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
UBQLN1Q9UMX0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN1Q9UMX0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
UBQLN1Q9UMX0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
UBQLN1Q9UMX0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.44■□□□□ 0.54
UBQLN1Q9UMX0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN1Q9UMX0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN1Q9UMX0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN1Q9UMX0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN1Q9UMX0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.44■□□□□ 0.54
UBQLN1Q9UMX0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN1Q9UMX0 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.44■□□□□ 0.54
UBQLN1Q9UMX0 KRT18P13-201ENST00000400056 1290 ntBASIC18.44■□□□□ 0.54
UBQLN1Q9UMX0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.44■□□□□ 0.54
UBQLN1Q9UMX0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.44■□□□□ 0.54
UBQLN1Q9UMX0 AC092865.5-201ENST00000545435 363 ntBASIC18.44■□□□□ 0.54
UBQLN1Q9UMX0 AC018845.2-201ENST00000568326 409 ntBASIC18.44■□□□□ 0.54
UBQLN1Q9UMX0 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.44■□□□□ 0.54
UBQLN1Q9UMX0 AC010507.1-201ENST00000633895 436 ntBASIC18.44■□□□□ 0.54
UBQLN1Q9UMX0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
UBQLN1Q9UMX0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.44■□□□□ 0.54
UBQLN1Q9UMX0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN1Q9UMX0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN1Q9UMX0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN1Q9UMX0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN1Q9UMX0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms