Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.23
MBD3L1Q8WWY6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 DGCR10-201ENST00000609839 495 ntBASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 AC133041.1-202ENST00000642053 222 ntBASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.58□□□□□ -0.24
MBD3L1Q8WWY6 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 AL162430.1-201ENST00000480705 870 ntBASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 AC002558.1-201ENST00000488906 803 ntBASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 AP002490.2-201ENST00000524791 560 ntBASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC13.57□□□□□ -0.24
MBD3L1Q8WWY6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms