Protein–RNA interactions for Protein: Q8N0V3

RBFA, Putative ribosome-binding factor A, mitochondrial, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFAQ8N0V3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RBFAQ8N0V3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RBFAQ8N0V3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RBFAQ8N0V3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RBFAQ8N0V3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RBFAQ8N0V3 AL645608.8-201ENST00000606034 2086 ntBASIC17.32■□□□□ 0.36
RBFAQ8N0V3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RBFAQ8N0V3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RBFAQ8N0V3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RBFAQ8N0V3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RBFAQ8N0V3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.31■□□□□ 0.36
RBFAQ8N0V3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RBFAQ8N0V3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RBFAQ8N0V3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.31■□□□□ 0.36
RBFAQ8N0V3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RBFAQ8N0V3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RBFAQ8N0V3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RBFAQ8N0V3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RBFAQ8N0V3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RBFAQ8N0V3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RBFAQ8N0V3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RBFAQ8N0V3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.31■□□□□ 0.36
RBFAQ8N0V3 KLF4P1-201ENST00000412782 1185 ntBASIC17.31■□□□□ 0.36
RBFAQ8N0V3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.31■□□□□ 0.36
RBFAQ8N0V3 STK19B-204ENST00000512515 211 ntBASIC17.31■□□□□ 0.36
RBFAQ8N0V3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.31■□□□□ 0.36
RBFAQ8N0V3 AC140113.2-201ENST00000604370 208 ntBASIC17.31■□□□□ 0.36
RBFAQ8N0V3 Z83851.2-201ENST00000609564 659 ntBASIC17.31■□□□□ 0.36
RBFAQ8N0V3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.31■□□□□ 0.36
RBFAQ8N0V3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.31■□□□□ 0.36
RBFAQ8N0V3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RBFAQ8N0V3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.31■□□□□ 0.36
RBFAQ8N0V3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RBFAQ8N0V3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RBFAQ8N0V3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RBFAQ8N0V3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RBFAQ8N0V3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.31■□□□□ 0.36
RBFAQ8N0V3 AC132938.5-201ENST00000624980 1813 ntBASIC17.31■□□□□ 0.36
RBFAQ8N0V3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 UNC93B6-202ENST00000528242 690 ntBASIC17.3■□□□□ 0.36
RBFAQ8N0V3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 AC009336.1-201ENST00000608941 1553 ntBASIC17.3■□□□□ 0.36
RBFAQ8N0V3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 SIGLEC16-201ENST00000599858 1437 ntBASIC17.3■□□□□ 0.36
RBFAQ8N0V3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.3■□□□□ 0.36
RBFAQ8N0V3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RBFAQ8N0V3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.29■□□□□ 0.36
RBFAQ8N0V3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RBFAQ8N0V3 AC148477.5-201ENST00000625164 1645 ntBASIC17.29■□□□□ 0.36
RBFAQ8N0V3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
RBFAQ8N0V3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RBFAQ8N0V3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RBFAQ8N0V3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
RBFAQ8N0V3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.29■□□□□ 0.36
RBFAQ8N0V3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RBFAQ8N0V3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RBFAQ8N0V3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RBFAQ8N0V3 MED15P5-201ENST00000423150 992 ntBASIC17.29■□□□□ 0.36
RBFAQ8N0V3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.29■□□□□ 0.36
RBFAQ8N0V3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.29■□□□□ 0.36
RBFAQ8N0V3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.29■□□□□ 0.36
RBFAQ8N0V3 AL356488.2-201ENST00000602755 427 ntBASIC17.29■□□□□ 0.36
RBFAQ8N0V3 AC139530.3-201ENST00000620344 690 ntBASIC17.29■□□□□ 0.36
RBFAQ8N0V3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.29■□□□□ 0.36
RBFAQ8N0V3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.29■□□□□ 0.36
RBFAQ8N0V3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RBFAQ8N0V3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RBFAQ8N0V3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RBFAQ8N0V3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
RBFAQ8N0V3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RBFAQ8N0V3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RBFAQ8N0V3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RBFAQ8N0V3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RBFAQ8N0V3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms