Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 GK-202ENST00000378941 458 ntTSL 3 BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 KRT18P32-201ENST00000424695 1287 ntBASIC18.62■□□□□ 0.57
HERC6Q8IVU3 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 AC140658.5-201ENST00000438532 169 ntBASIC18.62■□□□□ 0.57
HERC6Q8IVU3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.62■□□□□ 0.57
HERC6Q8IVU3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.62■□□□□ 0.57
HERC6Q8IVU3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HERC6Q8IVU3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.61■□□□□ 0.57
HERC6Q8IVU3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 AC129492.6-201ENST00000611383 1305 ntBASIC18.61■□□□□ 0.57
HERC6Q8IVU3 MIR661-201ENST00000384842 89 ntBASIC18.61■□□□□ 0.57
HERC6Q8IVU3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.61■□□□□ 0.57
HERC6Q8IVU3 FAM58DP-201ENST00000428076 619 ntBASIC18.61■□□□□ 0.57
HERC6Q8IVU3 KLF2P3-201ENST00000451977 1087 ntBASIC18.61■□□□□ 0.57
HERC6Q8IVU3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 RN7SL589P-201ENST00000481268 310 ntBASIC18.61■□□□□ 0.57
HERC6Q8IVU3 SLC25A6P2-201ENST00000497974 877 ntBASIC18.61■□□□□ 0.57
HERC6Q8IVU3 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.61■□□□□ 0.57
HERC6Q8IVU3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 AP001059.3-201ENST00000619053 235 ntBASIC18.61■□□□□ 0.57
HERC6Q8IVU3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.61■□□□□ 0.57
HERC6Q8IVU3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 TFAMP1-201ENST00000412727 736 ntBASIC18.6■□□□□ 0.57
HERC6Q8IVU3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.6■□□□□ 0.57
HERC6Q8IVU3 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms