Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 AC092053.1-201ENST00000605787 1936 ntBASIC17.98■□□□□ 0.47
RFX6Q8HWS3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 ARMC10P1-201ENST00000313754 855 ntBASIC17.98■□□□□ 0.47
RFX6Q8HWS3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 IGHV3-47-201ENST00000425060 335 ntBASIC17.98■□□□□ 0.47
RFX6Q8HWS3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 AC104819.1-201ENST00000504587 486 ntBASIC17.98■□□□□ 0.47
RFX6Q8HWS3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 MIR3180-1-201ENST00000580374 94 ntBASIC17.98■□□□□ 0.47
RFX6Q8HWS3 MIR3180-3-201ENST00000584616 94 ntBASIC17.98■□□□□ 0.47
RFX6Q8HWS3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 AD001527.2-201ENST00000622994 785 ntBASIC17.98■□□□□ 0.47
RFX6Q8HWS3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 INTS4P1-201ENST00000438455 1935 ntBASIC17.98■□□□□ 0.47
RFX6Q8HWS3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RFX6Q8HWS3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 AL135999.2-201ENST00000622438 1686 ntBASIC17.97■□□□□ 0.47
RFX6Q8HWS3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 AC092119.3-201ENST00000612618 583 ntBASIC17.97■□□□□ 0.47
RFX6Q8HWS3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFX6Q8HWS3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RFX6Q8HWS3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFX6Q8HWS3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RFX6Q8HWS3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFX6Q8HWS3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.96■□□□□ 0.47
RFX6Q8HWS3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFX6Q8HWS3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFX6Q8HWS3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RFX6Q8HWS3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFX6Q8HWS3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms