Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TRNP1Q6NT89 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRNP1Q6NT89 AC106886.4-201ENST00000623557 2502 ntBASIC17.93■□□□□ 0.46
TRNP1Q6NT89 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRNP1Q6NT89 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRNP1Q6NT89 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.93■□□□□ 0.46
TRNP1Q6NT89 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRNP1Q6NT89 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.93■□□□□ 0.46
TRNP1Q6NT89 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.93■□□□□ 0.46
TRNP1Q6NT89 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.93■□□□□ 0.46
TRNP1Q6NT89 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.93■□□□□ 0.46
TRNP1Q6NT89 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.93■□□□□ 0.46
TRNP1Q6NT89 SLC25A6P4-201ENST00000586535 553 ntBASIC17.93■□□□□ 0.46
TRNP1Q6NT89 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.93■□□□□ 0.46
TRNP1Q6NT89 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.93■□□□□ 0.46
TRNP1Q6NT89 MIR7706-201ENST00000613747 67 ntBASIC17.93■□□□□ 0.46
TRNP1Q6NT89 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.93■□□□□ 0.46
TRNP1Q6NT89 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.93■□□□□ 0.46
TRNP1Q6NT89 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.93■□□□□ 0.46
TRNP1Q6NT89 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRNP1Q6NT89 AL121761.2-201ENST00000598007 1648 ntBASIC17.93■□□□□ 0.46
TRNP1Q6NT89 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRNP1Q6NT89 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRNP1Q6NT89 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.93■□□□□ 0.46
TRNP1Q6NT89 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.93■□□□□ 0.46
TRNP1Q6NT89 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRNP1Q6NT89 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
TRNP1Q6NT89 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRNP1Q6NT89 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRNP1Q6NT89 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 PTCHD3P3-201ENST00000403073 906 ntBASIC17.92■□□□□ 0.46
TRNP1Q6NT89 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 FAM215A-202ENST00000632077 792 ntBASIC17.92■□□□□ 0.46
TRNP1Q6NT89 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 AP002414.3-201ENST00000589352 1468 ntBASIC17.92■□□□□ 0.46
TRNP1Q6NT89 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRNP1Q6NT89 AC243591.1-201ENST00000452967 1364 ntBASIC17.91■□□□□ 0.46
TRNP1Q6NT89 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRNP1Q6NT89 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRNP1Q6NT89 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRNP1Q6NT89 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRNP1Q6NT89 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRNP1Q6NT89 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRNP1Q6NT89 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
TRNP1Q6NT89 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRNP1Q6NT89 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.91■□□□□ 0.46
TRNP1Q6NT89 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRNP1Q6NT89 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRNP1Q6NT89 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRNP1Q6NT89 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRNP1Q6NT89 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.91■□□□□ 0.46
TRNP1Q6NT89 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRNP1Q6NT89 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRNP1Q6NT89 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.91■□□□□ 0.46
TRNP1Q6NT89 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.91■□□□□ 0.46
TRNP1Q6NT89 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.91■□□□□ 0.46
TRNP1Q6NT89 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.91■□□□□ 0.46
TRNP1Q6NT89 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
TRNP1Q6NT89 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.91■□□□□ 0.46
TRNP1Q6NT89 AC008735.5-201ENST00000623544 497 ntBASIC17.91■□□□□ 0.46
TRNP1Q6NT89 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRNP1Q6NT89 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms