Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF144AP50876 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RNF144AP50876 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RNF144AP50876 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF144AP50876 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF144AP50876 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF144AP50876 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF144AP50876 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF144AP50876 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF144AP50876 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF144AP50876 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RNF144AP50876 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF144AP50876 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF144AP50876 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF144AP50876 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF144AP50876 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RNF144AP50876 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF144AP50876 NKILA-202ENST00000614771 2598 ntBASIC16.09■□□□□ 0.17
RNF144AP50876 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF144AP50876 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF144AP50876 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF144AP50876 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF144AP50876 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF144AP50876 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF144AP50876 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF144AP50876 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF144AP50876 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF144AP50876 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF144AP50876 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RNF144AP50876 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF144AP50876 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.09■□□□□ 0.17
RNF144AP50876 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF144AP50876 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF144AP50876 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF144AP50876 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF144AP50876 AC009533.2-201ENST00000543664 586 ntBASIC16.09■□□□□ 0.17
RNF144AP50876 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
RNF144AP50876 AL732292.2-201ENST00000609649 430 ntBASIC16.09■□□□□ 0.17
RNF144AP50876 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.09■□□□□ 0.17
RNF144AP50876 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RNF144AP50876 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF144AP50876 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF144AP50876 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
RNF144AP50876 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF144AP50876 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF144AP50876 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF144AP50876 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF144AP50876 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RNF144AP50876 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF144AP50876 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF144AP50876 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF144AP50876 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF144AP50876 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF144AP50876 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF144AP50876 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF144AP50876 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RNF144AP50876 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF144AP50876 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF144AP50876 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF144AP50876 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RNF144AP50876 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
RNF144AP50876 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RNF144AP50876 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RNF144AP50876 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
RNF144AP50876 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
RNF144AP50876 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF144AP50876 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF144AP50876 AL356309.3-201ENST00000624132 1934 ntBASIC16.08■□□□□ 0.16
RNF144AP50876 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
RNF144AP50876 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF144AP50876 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
RNF144AP50876 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF144AP50876 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF144AP50876 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF144AP50876 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
RNF144AP50876 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF144AP50876 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF144AP50876 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF144AP50876 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF144AP50876 IGHV3-52-201ENST00000519770 353 ntBASIC16.08■□□□□ 0.16
RNF144AP50876 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.08■□□□□ 0.16
RNF144AP50876 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.08■□□□□ 0.16
RNF144AP50876 AC011467.2-201ENST00000598425 242 ntBASIC16.08■□□□□ 0.16
RNF144AP50876 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF144AP50876 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF144AP50876 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RNF144AP50876 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
RNF144AP50876 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF144AP50876 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF144AP50876 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF144AP50876 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF144AP50876 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.08■□□□□ 0.16
RNF144AP50876 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF144AP50876 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF144AP50876 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
RNF144AP50876 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF144AP50876 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RNF144AP50876 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF144AP50876 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF144AP50876 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms