Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CKS2P33552 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CKS2P33552 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CKS2P33552 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CKS2P33552 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CKS2P33552 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CKS2P33552 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC12.76□□□□□ -0.37
CKS2P33552 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CKS2P33552 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CKS2P33552 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CKS2P33552 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CKS2P33552 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CKS2P33552 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC12.76□□□□□ -0.37
CKS2P33552 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CKS2P33552 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CKS2P33552 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC12.76□□□□□ -0.37
CKS2P33552 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CKS2P33552 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CKS2P33552 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CKS2P33552 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CKS2P33552 AC026271.2-201ENST00000428091 497 ntBASIC12.76□□□□□ -0.37
CKS2P33552 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC12.76□□□□□ -0.37
CKS2P33552 CA15P1-201ENST00000481698 905 ntBASIC12.76□□□□□ -0.37
CKS2P33552 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC12.76□□□□□ -0.37
CKS2P33552 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC12.76□□□□□ -0.37
CKS2P33552 AC104390.1-201ENST00000555663 520 ntBASIC12.76□□□□□ -0.37
CKS2P33552 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC12.76□□□□□ -0.37
CKS2P33552 MIR5787-201ENST00000611784 55 ntBASIC12.76□□□□□ -0.37
CKS2P33552 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CKS2P33552 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.76□□□□□ -0.37
CKS2P33552 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CKS2P33552 AC092171.3-201ENST00000610122 2651 ntBASIC12.76□□□□□ -0.37
CKS2P33552 ANKRD26P3-201ENST00000454044 2748 ntBASIC12.76□□□□□ -0.37
CKS2P33552 LINC01311-201ENST00000565162 1445 ntBASIC12.76□□□□□ -0.37
CKS2P33552 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC12.76□□□□□ -0.37
CKS2P33552 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CKS2P33552 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC12.76□□□□□ -0.37
CKS2P33552 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CKS2P33552 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CKS2P33552 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
CKS2P33552 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
CKS2P33552 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC12.76□□□□□ -0.37
CKS2P33552 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CKS2P33552 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC12.76□□□□□ -0.37
CKS2P33552 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CKS2P33552 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS2P33552 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC12.75□□□□□ -0.37
CKS2P33552 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS2P33552 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS2P33552 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS2P33552 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS2P33552 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CKS2P33552 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS2P33552 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS2P33552 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS2P33552 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS2P33552 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC12.75□□□□□ -0.37
CKS2P33552 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS2P33552 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CKS2P33552 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CKS2P33552 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS2P33552 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC12.75□□□□□ -0.37
CKS2P33552 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC12.75□□□□□ -0.37
CKS2P33552 AC069152.1-201ENST00000438030 544 ntBASIC12.75□□□□□ -0.37
CKS2P33552 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CKS2P33552 MFAP1P1-201ENST00000442257 1255 ntBASIC12.75□□□□□ -0.37
CKS2P33552 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.75□□□□□ -0.37
CKS2P33552 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC12.75□□□□□ -0.37
CKS2P33552 FDX2-207ENST00000494368 584 ntTSL 4 BASIC12.75□□□□□ -0.37
CKS2P33552 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS2P33552 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC12.75□□□□□ -0.37
CKS2P33552 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC12.75□□□□□ -0.37
CKS2P33552 AP003097.1-201ENST00000530657 1135 ntBASIC12.75□□□□□ -0.37
CKS2P33552 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CKS2P33552 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC12.75□□□□□ -0.37
CKS2P33552 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS2P33552 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CKS2P33552 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC12.75□□□□□ -0.37
CKS2P33552 RARRES2P6-201ENST00000567333 442 ntBASIC12.75□□□□□ -0.37
CKS2P33552 SLC25A1P4-201ENST00000567977 778 ntBASIC12.75□□□□□ -0.37
CKS2P33552 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CKS2P33552 MED29-202ENST00000594368 1471 ntTSL 2 BASIC12.75□□□□□ -0.37
CKS2P33552 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CKS2P33552 AC124016.1-201ENST00000609552 612 ntBASIC12.75□□□□□ -0.37
CKS2P33552 AC096733.2-201ENST00000609937 1394 ntBASIC12.75□□□□□ -0.37
CKS2P33552 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CKS2P33552 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CKS2P33552 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS2P33552 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CKS2P33552 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS2P33552 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC12.75□□□□□ -0.37
CKS2P33552 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
CKS2P33552 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CKS2P33552 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS2P33552 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS2P33552 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CKS2P33552 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS2P33552 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS2P33552 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS2P33552 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms