Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CHMLP26374 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.81■□□□□ 0.92
CHMLP26374 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.81■□□□□ 0.92
CHMLP26374 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHMLP26374 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CHMLP26374 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHMLP26374 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CHMLP26374 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMLP26374 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.8■□□□□ 0.92
CHMLP26374 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMLP26374 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMLP26374 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHMLP26374 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMLP26374 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CHMLP26374 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CHMLP26374 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.8■□□□□ 0.92
CHMLP26374 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHMLP26374 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.8■□□□□ 0.92
CHMLP26374 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.8■□□□□ 0.92
CHMLP26374 AC012313.10-201ENST00000623509 926 ntBASIC20.8■□□□□ 0.92
CHMLP26374 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.8■□□□□ 0.92
CHMLP26374 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMLP26374 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.8■□□□□ 0.92
CHMLP26374 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMLP26374 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.8■□□□□ 0.92
CHMLP26374 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
CHMLP26374 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHMLP26374 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.8■□□□□ 0.92
CHMLP26374 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.8■□□□□ 0.92
CHMLP26374 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHMLP26374 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
CHMLP26374 AC090340.1-201ENST00000620778 4980 ntBASIC20.79■□□□□ 0.92
CHMLP26374 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CHMLP26374 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMLP26374 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CHMLP26374 AC078925.2-201ENST00000624013 1973 ntBASIC20.79■□□□□ 0.92
CHMLP26374 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.79■□□□□ 0.92
CHMLP26374 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMLP26374 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMLP26374 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.79■□□□□ 0.92
CHMLP26374 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.79■□□□□ 0.92
CHMLP26374 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMLP26374 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHMLP26374 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.79■□□□□ 0.92
CHMLP26374 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHMLP26374 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMLP26374 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHMLP26374 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMLP26374 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMLP26374 DUX4L17-201ENST00000557360 1267 ntBASIC20.79■□□□□ 0.92
CHMLP26374 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.79■□□□□ 0.92
CHMLP26374 MTDHP3-201ENST00000594186 672 ntBASIC20.79■□□□□ 0.92
CHMLP26374 AC064862.7-201ENST00000604520 867 ntBASIC20.79■□□□□ 0.92
CHMLP26374 AL355877.3-201ENST00000622820 899 ntBASIC20.79■□□□□ 0.92
CHMLP26374 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHMLP26374 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMLP26374 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.79■□□□□ 0.92
CHMLP26374 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.79■□□□□ 0.92
CHMLP26374 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.79■□□□□ 0.92
CHMLP26374 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CHMLP26374 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMLP26374 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMLP26374 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMLP26374 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHMLP26374 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHMLP26374 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.78■□□□□ 0.92
CHMLP26374 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHMLP26374 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMLP26374 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMLP26374 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.78■□□□□ 0.92
CHMLP26374 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMLP26374 AKR1C7P-201ENST00000305623 895 ntBASIC20.78■□□□□ 0.92
CHMLP26374 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.78■□□□□ 0.92
CHMLP26374 FGFR3P6-201ENST00000457012 610 ntBASIC20.78■□□□□ 0.92
CHMLP26374 AC091304.2-201ENST00000564639 760 ntBASIC20.78■□□□□ 0.92
CHMLP26374 AL353135.1-201ENST00000606729 504 ntBASIC20.78■□□□□ 0.92
CHMLP26374 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMLP26374 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.78■□□□□ 0.92
CHMLP26374 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.78■□□□□ 0.92
CHMLP26374 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMLP26374 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.78■□□□□ 0.92
CHMLP26374 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CHMLP26374 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMLP26374 AL356309.3-201ENST00000624132 1934 ntBASIC20.78■□□□□ 0.92
CHMLP26374 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.78■□□□□ 0.92
CHMLP26374 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CHMLP26374 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHMLP26374 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.78■□□□□ 0.92
CHMLP26374 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMLP26374 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHMLP26374 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CHMLP26374 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMLP26374 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMLP26374 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CHMLP26374 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMLP26374 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMLP26374 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHMLP26374 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHMLP26374 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.77■□□□□ 0.92
CHMLP26374 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms