Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MBD3O95983 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MBD3O95983 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
MBD3O95983 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.82■□□□□ 0.76
MBD3O95983 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MBD3O95983 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.82■□□□□ 0.76
MBD3O95983 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
MBD3O95983 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MBD3O95983 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MBD3O95983 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.82■□□□□ 0.76
MBD3O95983 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.82■□□□□ 0.76
MBD3O95983 MTCL1P1-201ENST00000446207 792 ntBASIC19.82■□□□□ 0.76
MBD3O95983 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
MBD3O95983 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.82■□□□□ 0.76
MBD3O95983 IGHV3-52-201ENST00000519770 353 ntBASIC19.82■□□□□ 0.76
MBD3O95983 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.82■□□□□ 0.76
MBD3O95983 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.82■□□□□ 0.76
MBD3O95983 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.82■□□□□ 0.76
MBD3O95983 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
MBD3O95983 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.82■□□□□ 0.76
MBD3O95983 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.82■□□□□ 0.76
MBD3O95983 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MBD3O95983 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
MBD3O95983 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MBD3O95983 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MBD3O95983 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MBD3O95983 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.82■□□□□ 0.76
MBD3O95983 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MBD3O95983 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.82■□□□□ 0.76
MBD3O95983 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MBD3O95983 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.82■□□□□ 0.76
MBD3O95983 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
MBD3O95983 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MBD3O95983 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MBD3O95983 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
MBD3O95983 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.81■□□□□ 0.76
MBD3O95983 AC097374.2-201ENST00000618617 1306 ntBASIC19.81■□□□□ 0.76
MBD3O95983 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MBD3O95983 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.81■□□□□ 0.76
MBD3O95983 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MBD3O95983 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MBD3O95983 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MBD3O95983 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.81■□□□□ 0.76
MBD3O95983 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
MBD3O95983 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MBD3O95983 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
MBD3O95983 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.81■□□□□ 0.76
MBD3O95983 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
MBD3O95983 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
MBD3O95983 KRT18P48-201ENST00000434763 852 ntBASIC19.81■□□□□ 0.76
MBD3O95983 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.81■□□□□ 0.76
MBD3O95983 AP002490.2-201ENST00000524791 560 ntBASIC19.81■□□□□ 0.76
MBD3O95983 AC142381.4-202ENST00000563973 229 ntBASIC19.81■□□□□ 0.76
MBD3O95983 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.81■□□□□ 0.76
MBD3O95983 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.81■□□□□ 0.76
MBD3O95983 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MBD3O95983 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.81■□□□□ 0.76
MBD3O95983 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MBD3O95983 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.81■□□□□ 0.76
MBD3O95983 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MBD3O95983 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
MBD3O95983 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC19.81■□□□□ 0.76
MBD3O95983 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
MBD3O95983 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MBD3O95983 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
MBD3O95983 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3O95983 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3O95983 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.8■□□□□ 0.76
MBD3O95983 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3O95983 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3O95983 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
MBD3O95983 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.8■□□□□ 0.76
MBD3O95983 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3O95983 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3O95983 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3O95983 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.8■□□□□ 0.76
MBD3O95983 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3O95983 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3O95983 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3O95983 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3O95983 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
MBD3O95983 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3O95983 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3O95983 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3O95983 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3O95983 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.8■□□□□ 0.76
MBD3O95983 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.8■□□□□ 0.76
MBD3O95983 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
MBD3O95983 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
MBD3O95983 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.8■□□□□ 0.76
MBD3O95983 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
MBD3O95983 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.8■□□□□ 0.76
MBD3O95983 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.8■□□□□ 0.76
MBD3O95983 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.8■□□□□ 0.76
MBD3O95983 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.8■□□□□ 0.76
MBD3O95983 AC019129.2-201ENST00000609837 1235 ntBASIC19.8■□□□□ 0.76
MBD3O95983 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3O95983 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3O95983 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3O95983 AC092364.2-201ENST00000596710 2692 ntBASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms