Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH4O75427 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.96■□□□□ 0.47
LRCH4O75427 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.96■□□□□ 0.47
LRCH4O75427 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH4O75427 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH4O75427 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH4O75427 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH4O75427 LINC00982-205ENST00000420957 435 ntBASIC17.96■□□□□ 0.47
LRCH4O75427 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.96■□□□□ 0.47
LRCH4O75427 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.96■□□□□ 0.47
LRCH4O75427 PRYP5-201ENST00000451909 266 ntBASIC17.96■□□□□ 0.47
LRCH4O75427 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH4O75427 BX005266.1-201ENST00000473402 457 ntBASIC17.96■□□□□ 0.47
LRCH4O75427 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH4O75427 NKAPP1-205ENST00000585790 367 ntBASIC17.96■□□□□ 0.47
LRCH4O75427 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.96■□□□□ 0.47
LRCH4O75427 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH4O75427 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH4O75427 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH4O75427 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH4O75427 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.96■□□□□ 0.47
LRCH4O75427 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH4O75427 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH4O75427 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH4O75427 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.96■□□□□ 0.47
LRCH4O75427 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH4O75427 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH4O75427 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LRCH4O75427 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
LRCH4O75427 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH4O75427 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH4O75427 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH4O75427 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.95■□□□□ 0.46
LRCH4O75427 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH4O75427 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH4O75427 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH4O75427 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH4O75427 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH4O75427 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH4O75427 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
LRCH4O75427 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH4O75427 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH4O75427 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH4O75427 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH4O75427 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH4O75427 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LRCH4O75427 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LRCH4O75427 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LRCH4O75427 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH4O75427 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH4O75427 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.95■□□□□ 0.46
LRCH4O75427 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.95■□□□□ 0.46
LRCH4O75427 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH4O75427 AC091304.2-201ENST00000564639 760 ntBASIC17.95■□□□□ 0.46
LRCH4O75427 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.95■□□□□ 0.46
LRCH4O75427 AC012313.10-201ENST00000623509 926 ntBASIC17.95■□□□□ 0.46
LRCH4O75427 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH4O75427 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.95■□□□□ 0.46
LRCH4O75427 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.95■□□□□ 0.46
LRCH4O75427 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH4O75427 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
LRCH4O75427 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH4O75427 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH4O75427 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH4O75427 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH4O75427 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH4O75427 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH4O75427 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.94■□□□□ 0.46
LRCH4O75427 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LRCH4O75427 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH4O75427 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH4O75427 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH4O75427 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH4O75427 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH4O75427 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH4O75427 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH4O75427 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH4O75427 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH4O75427 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.94■□□□□ 0.46
LRCH4O75427 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.94■□□□□ 0.46
LRCH4O75427 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.94■□□□□ 0.46
LRCH4O75427 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.94■□□□□ 0.46
LRCH4O75427 MTDHP3-201ENST00000594186 672 ntBASIC17.94■□□□□ 0.46
LRCH4O75427 REXO1L6P-202ENST00000619970 1078 ntBASIC17.94■□□□□ 0.46
LRCH4O75427 AL355877.3-201ENST00000622820 899 ntBASIC17.94■□□□□ 0.46
LRCH4O75427 AL139288.1-201ENST00000623748 933 ntBASIC17.94■□□□□ 0.46
LRCH4O75427 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.94■□□□□ 0.46
LRCH4O75427 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
LRCH4O75427 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH4O75427 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH4O75427 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH4O75427 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
LRCH4O75427 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH4O75427 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH4O75427 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH4O75427 AC084018.2-201ENST00000613093 2607 ntBASIC17.94■□□□□ 0.46
LRCH4O75427 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.94■□□□□ 0.46
LRCH4O75427 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH4O75427 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.94■□□□□ 0.46
LRCH4O75427 AL356309.3-201ENST00000624132 1934 ntBASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms