Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 AL355877.3-201ENST00000622820 899 ntBASIC16.61■□□□□ 0.25
PRAMEF4O60810 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF4O60810 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF4O60810 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PRAMEF4O60810 RNF216P1-203ENST00000404404 2427 ntBASIC16.61■□□□□ 0.25
PRAMEF4O60810 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF4O60810 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF4O60810 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PRAMEF4O60810 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF4O60810 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF4O60810 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.61■□□□□ 0.25
PRAMEF4O60810 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.61■□□□□ 0.25
PRAMEF4O60810 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PRAMEF4O60810 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.6■□□□□ 0.25
PRAMEF4O60810 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF4O60810 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF4O60810 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
PRAMEF4O60810 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF4O60810 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.6■□□□□ 0.25
PRAMEF4O60810 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF4O60810 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PRAMEF4O60810 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
PRAMEF4O60810 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.6■□□□□ 0.25
PRAMEF4O60810 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
PRAMEF4O60810 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF4O60810 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF4O60810 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.6■□□□□ 0.25
PRAMEF4O60810 RBM17P3-201ENST00000417687 1192 ntBASIC16.6■□□□□ 0.25
PRAMEF4O60810 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF4O60810 AF238378.1-201ENST00000526806 358 ntBASIC16.6■□□□□ 0.25
PRAMEF4O60810 SART3-203ENST00000546611 1184 ntBASIC16.6■□□□□ 0.25
PRAMEF4O60810 AC124947.2-201ENST00000547118 1133 ntBASIC16.6■□□□□ 0.25
PRAMEF4O60810 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.6■□□□□ 0.25
PRAMEF4O60810 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.6■□□□□ 0.25
PRAMEF4O60810 AC064862.7-201ENST00000604520 867 ntBASIC16.6■□□□□ 0.25
PRAMEF4O60810 REXO1L6P-202ENST00000619970 1078 ntBASIC16.6■□□□□ 0.25
PRAMEF4O60810 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.6■□□□□ 0.25
PRAMEF4O60810 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PRAMEF4O60810 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF4O60810 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF4O60810 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PRAMEF4O60810 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF4O60810 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF4O60810 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.6■□□□□ 0.25
PRAMEF4O60810 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF4O60810 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF4O60810 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF4O60810 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PRAMEF4O60810 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF4O60810 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF4O60810 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF4O60810 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF4O60810 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF4O60810 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF4O60810 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF4O60810 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF4O60810 FLJ38576-201ENST00000623820 2459 ntBASIC16.59■□□□□ 0.25
PRAMEF4O60810 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.59■□□□□ 0.25
PRAMEF4O60810 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF4O60810 AC084018.2-201ENST00000613093 2607 ntBASIC16.59■□□□□ 0.25
PRAMEF4O60810 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
PRAMEF4O60810 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF4O60810 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF4O60810 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF4O60810 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF4O60810 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PRAMEF4O60810 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PRAMEF4O60810 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PRAMEF4O60810 KRT18P56-201ENST00000507275 550 ntBASIC16.59■□□□□ 0.25
PRAMEF4O60810 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.59■□□□□ 0.25
PRAMEF4O60810 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.59■□□□□ 0.25
PRAMEF4O60810 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.59■□□□□ 0.25
PRAMEF4O60810 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.59■□□□□ 0.25
PRAMEF4O60810 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.59■□□□□ 0.25
PRAMEF4O60810 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.59■□□□□ 0.25
PRAMEF4O60810 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF4O60810 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF4O60810 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF4O60810 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.59■□□□□ 0.25
PRAMEF4O60810 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PRAMEF4O60810 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF4O60810 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PRAMEF4O60810 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.59■□□□□ 0.25
PRAMEF4O60810 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PRAMEF4O60810 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF4O60810 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF4O60810 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF4O60810 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.59■□□□□ 0.25
PRAMEF4O60810 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.59■□□□□ 0.25
PRAMEF4O60810 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PRAMEF4O60810 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PRAMEF4O60810 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PRAMEF4O60810 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PRAMEF4O60810 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PRAMEF4O60810 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.58■□□□□ 0.25
PRAMEF4O60810 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PRAMEF4O60810 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF4O60810 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF4O60810 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF4O60810 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms