Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 TNRC18P2-201ENST00000417666 2714 ntBASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 MYO15B-237ENST00000642007 4893 ntBASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 AC092053.1-201ENST00000605787 1936 ntBASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 CYP2T1P-201ENST00000432607 1285 ntBASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAPPC1Q9Y5R8 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAPPC1Q9Y5R8 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms