Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 UNC93B6-202ENST00000528242 690 ntBASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 AC040169.1-201ENST00000565382 521 ntBASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 AD001527.2-201ENST00000622994 785 ntBASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 PGM5P2-202ENST00000637225 1043 ntBASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 AL645608.8-201ENST00000606034 2086 ntBASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 SIGLEC16-201ENST00000599858 1437 ntBASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 UPF3AP3-201ENST00000420996 769 ntBASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA3Q9Y5H0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 DNAJB3-201ENST00000446806 729 ntBASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 AC006557.2-201ENST00000592985 1240 ntBASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 AP002414.3-201ENST00000589352 1468 ntBASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHGA3Q9Y5H0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA3Q9Y5H0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA3Q9Y5H0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PCDHGA3Q9Y5H0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHGA3Q9Y5H0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PCDHGA3Q9Y5H0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA3Q9Y5H0 HTR7P1-202ENST00000624664 4411 ntBASIC16.84■□□□□ 0.29
PCDHGA3Q9Y5H0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms