Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 AC093525.9-201ENST00000624961 1746 ntBASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RCL1Q9Y2P8 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 SEC1P-202ENST00000473944 940 ntBASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 AL353719.1-201ENST00000566847 864 ntBASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RCL1Q9Y2P8 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 KRT18P65-201ENST00000439811 1286 ntBASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 AC006058.3-201ENST00000606217 1069 ntBASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
RCL1Q9Y2P8 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RCL1Q9Y2P8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.17□□□□□ -0.14
RCL1Q9Y2P8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RCL1Q9Y2P8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RCL1Q9Y2P8 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RCL1Q9Y2P8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.17□□□□□ -0.14
RCL1Q9Y2P8 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RCL1Q9Y2P8 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RCL1Q9Y2P8 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.17□□□□□ -0.14
RCL1Q9Y2P8 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.17□□□□□ -0.14
RCL1Q9Y2P8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.17□□□□□ -0.14
RCL1Q9Y2P8 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms