Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 AC024563.2-201ENST00000603282 481 ntBASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CALCOCO1Q9P1Z2 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.95■□□□□ 0.62
CALCOCO1Q9P1Z2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 AC023824.1-201ENST00000562945 2975 ntBASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 LINC00167-201ENST00000530583 1419 ntBASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
CALCOCO1Q9P1Z2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms