Protein–RNA interactions for Protein: Q9NZR2

LRP1B, Low-density lipoprotein receptor-related protein 1B, humanhuman

Predictions only

Length 4,599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1BQ9NZR2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 STK4-201ENST00000372801 2038 ntTSL 2 BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 AC112492.5-201ENST00000421897 457 ntBASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 AL138918.1-201ENST00000568306 659 ntBASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LRP1BQ9NZR2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC10.83□□□□□ -0.67
LRP1BQ9NZR2 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.67
LRP1BQ9NZR2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 AC012317.2-201ENST00000623305 2251 ntBASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 IFT20-216ENST00000588477 774 ntTSL 5 BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 IGHV3-62-201ENST00000520057 340 ntBASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 AC129492.6-201ENST00000611383 1305 ntBASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC10.83□□□□□ -0.68
LRP1BQ9NZR2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 SPDYE18-201ENST00000510091 1050 ntBASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 MIR4453-201ENST00000584019 89 ntBASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms