Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.38■□□□□ 0.21
COL21A1Q96P44 MIR3652-201ENST00000579335 131 ntBASIC16.38■□□□□ 0.21
COL21A1Q96P44 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.38■□□□□ 0.21
COL21A1Q96P44 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.38■□□□□ 0.21
COL21A1Q96P44 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL21A1Q96P44 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL21A1Q96P44 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL21A1Q96P44 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL21A1Q96P44 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
COL21A1Q96P44 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL21A1Q96P44 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL21A1Q96P44 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL21A1Q96P44 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL21A1Q96P44 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL21A1Q96P44 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL21A1Q96P44 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.37■□□□□ 0.21
COL21A1Q96P44 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
COL21A1Q96P44 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL21A1Q96P44 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL21A1Q96P44 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL21A1Q96P44 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
COL21A1Q96P44 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COL21A1Q96P44 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
COL21A1Q96P44 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COL21A1Q96P44 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.37■□□□□ 0.21
COL21A1Q96P44 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL21A1Q96P44 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.37■□□□□ 0.21
COL21A1Q96P44 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL21A1Q96P44 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.37■□□□□ 0.21
COL21A1Q96P44 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.37■□□□□ 0.21
COL21A1Q96P44 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.37■□□□□ 0.21
COL21A1Q96P44 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.37■□□□□ 0.21
COL21A1Q96P44 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COL21A1Q96P44 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.37■□□□□ 0.21
COL21A1Q96P44 AC009533.2-201ENST00000543664 586 ntBASIC16.37■□□□□ 0.21
COL21A1Q96P44 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.37■□□□□ 0.21
COL21A1Q96P44 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COL21A1Q96P44 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL21A1Q96P44 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL21A1Q96P44 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.37■□□□□ 0.21
COL21A1Q96P44 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL21A1Q96P44 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.37■□□□□ 0.21
COL21A1Q96P44 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL21A1Q96P44 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
COL21A1Q96P44 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
COL21A1Q96P44 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL21A1Q96P44 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL21A1Q96P44 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL21A1Q96P44 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.37■□□□□ 0.21
COL21A1Q96P44 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.37■□□□□ 0.21
COL21A1Q96P44 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.37■□□□□ 0.21
COL21A1Q96P44 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.37■□□□□ 0.21
COL21A1Q96P44 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL21A1Q96P44 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.37■□□□□ 0.21
COL21A1Q96P44 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL21A1Q96P44 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
COL21A1Q96P44 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.36■□□□□ 0.21
COL21A1Q96P44 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
COL21A1Q96P44 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL21A1Q96P44 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL21A1Q96P44 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL21A1Q96P44 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL21A1Q96P44 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
COL21A1Q96P44 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL21A1Q96P44 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL21A1Q96P44 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL21A1Q96P44 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL21A1Q96P44 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
COL21A1Q96P44 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
COL21A1Q96P44 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL21A1Q96P44 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL21A1Q96P44 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL21A1Q96P44 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL21A1Q96P44 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.36■□□□□ 0.21
COL21A1Q96P44 AC099336.1-202ENST00000602961 463 ntBASIC16.36■□□□□ 0.21
COL21A1Q96P44 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.36■□□□□ 0.21
COL21A1Q96P44 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.36■□□□□ 0.21
COL21A1Q96P44 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL21A1Q96P44 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL21A1Q96P44 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
COL21A1Q96P44 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL21A1Q96P44 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL21A1Q96P44 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL21A1Q96P44 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.36■□□□□ 0.21
COL21A1Q96P44 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL21A1Q96P44 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL21A1Q96P44 AL139384.1-201ENST00000612143 3047 ntBASIC16.36■□□□□ 0.21
COL21A1Q96P44 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL21A1Q96P44 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.36■□□□□ 0.21
COL21A1Q96P44 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
COL21A1Q96P44 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL21A1Q96P44 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
COL21A1Q96P44 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COL21A1Q96P44 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL21A1Q96P44 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL21A1Q96P44 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.35■□□□□ 0.21
COL21A1Q96P44 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COL21A1Q96P44 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL21A1Q96P44 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COL21A1Q96P44 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms