Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 AL355355.2-201ENST00000442321 338 ntBASIC12.97□□□□□ -0.33
NUP35Q8NFH5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 CA15P1-201ENST00000481698 905 ntBASIC12.97□□□□□ -0.33
NUP35Q8NFH5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 AL138781.1-201ENST00000566567 1274 ntBASIC12.97□□□□□ -0.33
NUP35Q8NFH5 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 WT1-AS_3.1-201ENST00000613262 234 ntBASIC12.97□□□□□ -0.33
NUP35Q8NFH5 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NUP35Q8NFH5 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 SERF2-207ENST00000409614 582 ntTSL 2 BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 FDX2-207ENST00000494368 584 ntTSL 4 BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 AC124947.2-201ENST00000547118 1133 ntBASIC12.96□□□□□ -0.33
NUP35Q8NFH5 AC233263.1-201ENST00000578059 224 ntBASIC12.96□□□□□ -0.33
NUP35Q8NFH5 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 AC112497.1-201ENST00000624824 639 ntBASIC12.96□□□□□ -0.33
NUP35Q8NFH5 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP35Q8NFH5 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
NUP35Q8NFH5 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC12.96□□□□□ -0.34
NUP35Q8NFH5 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NUP35Q8NFH5 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC12.96□□□□□ -0.34
NUP35Q8NFH5 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NUP35Q8NFH5 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NUP35Q8NFH5 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NUP35Q8NFH5 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC12.96□□□□□ -0.34
NUP35Q8NFH5 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
NUP35Q8NFH5 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NUP35Q8NFH5 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC12.96□□□□□ -0.34
NUP35Q8NFH5 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC12.96□□□□□ -0.34
NUP35Q8NFH5 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms