Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.03□□□□□ -0.32
HIST1H2BDP58876 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
HIST1H2BDP58876 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HIST1H2BDP58876 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.32
HIST1H2BDP58876 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
HIST1H2BDP58876 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HIST1H2BDP58876 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
HIST1H2BDP58876 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
HIST1H2BDP58876 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.32
HIST1H2BDP58876 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.02□□□□□ -0.32
HIST1H2BDP58876 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
HIST1H2BDP58876 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.32
HIST1H2BDP58876 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.02□□□□□ -0.32
HIST1H2BDP58876 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
HIST1H2BDP58876 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HIST1H2BDP58876 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H2BDP58876 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
HIST1H2BDP58876 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
HIST1H2BDP58876 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H2BDP58876 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H2BDP58876 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
HIST1H2BDP58876 ENSA-205ENST00000361532 792 ntTSL 2 BASIC13.02□□□□□ -0.33
HIST1H2BDP58876 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H2BDP58876 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H2BDP58876 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
HIST1H2BDP58876 TERF1P5-201ENST00000477545 1207 ntBASIC13.02□□□□□ -0.33
HIST1H2BDP58876 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H2BDP58876 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.02□□□□□ -0.33
HIST1H2BDP58876 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
HIST1H2BDP58876 AC006486.2-201ENST00000624246 2199 ntBASIC13.02□□□□□ -0.33
HIST1H2BDP58876 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.02□□□□□ -0.33
HIST1H2BDP58876 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H2BDP58876 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.02□□□□□ -0.33
HIST1H2BDP58876 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H2BDP58876 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H2BDP58876 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.02□□□□□ -0.33
HIST1H2BDP58876 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.02□□□□□ -0.33
HIST1H2BDP58876 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.02□□□□□ -0.33
HIST1H2BDP58876 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H2BDP58876 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.02□□□□□ -0.33
HIST1H2BDP58876 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
HIST1H2BDP58876 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H2BDP58876 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
HIST1H2BDP58876 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 AL365209.1-201ENST00000624418 6473 ntBASIC13.01□□□□□ -0.33
HIST1H2BDP58876 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 AC009949.1-201ENST00000623048 1830 ntBASIC13.01□□□□□ -0.33
HIST1H2BDP58876 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 AL596087.1-201ENST00000400979 1969 ntBASIC13.01□□□□□ -0.33
HIST1H2BDP58876 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
HIST1H2BDP58876 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13□□□□□ -0.33
HIST1H2BDP58876 AC107918.4-201ENST00000641966 3141 ntBASIC13□□□□□ -0.33
HIST1H2BDP58876 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H2BDP58876 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms