Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL1P22362 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.89□□□□□ -0.03
CCL1P22362 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.88□□□□□ -0.03
CCL1P22362 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL1P22362 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL1P22362 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCL1P22362 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL1P22362 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.88□□□□□ -0.03
CCL1P22362 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL1P22362 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL1P22362 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCL1P22362 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.88□□□□□ -0.03
CCL1P22362 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.88□□□□□ -0.03
CCL1P22362 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.88□□□□□ -0.03
CCL1P22362 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL1P22362 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CCL1P22362 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCL1P22362 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL1P22362 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CCL1P22362 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CCL1P22362 MINOS1P3-201ENST00000457048 203 ntBASIC14.88□□□□□ -0.03
CCL1P22362 TOB2P1-201ENST00000469761 992 ntBASIC14.88□□□□□ -0.03
CCL1P22362 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL1P22362 AL049597.2-201ENST00000565575 961 ntBASIC14.88□□□□□ -0.03
CCL1P22362 AC114341.1-201ENST00000618070 349 ntBASIC14.88□□□□□ -0.03
CCL1P22362 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL1P22362 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL1P22362 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCL1P22362 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL1P22362 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL1P22362 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CCL1P22362 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCL1P22362 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CCL1P22362 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL1P22362 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL1P22362 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL1P22362 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CCL1P22362 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCL1P22362 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.87□□□□□ -0.03
CCL1P22362 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.87□□□□□ -0.03
CCL1P22362 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.87□□□□□ -0.03
CCL1P22362 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CCL1P22362 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
CCL1P22362 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.87□□□□□ -0.03
CCL1P22362 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CCL1P22362 AL603756.1-201ENST00000606511 2163 ntBASIC14.87□□□□□ -0.03
CCL1P22362 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCL1P22362 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL1P22362 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.87□□□□□ -0.03
CCL1P22362 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.87□□□□□ -0.03
CCL1P22362 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL1P22362 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL1P22362 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCL1P22362 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.87□□□□□ -0.03
CCL1P22362 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CCL1P22362 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL1P22362 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
CCL1P22362 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCL1P22362 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL1P22362 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCL1P22362 RCN1P2-201ENST00000398357 915 ntBASIC14.87□□□□□ -0.03
CCL1P22362 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.87□□□□□ -0.03
CCL1P22362 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.87□□□□□ -0.03
CCL1P22362 NUS1P1-201ENST00000446295 882 ntBASIC14.87□□□□□ -0.03
CCL1P22362 SIGLEC30P-201ENST00000455569 941 ntBASIC14.87□□□□□ -0.03
CCL1P22362 AC096582.2-201ENST00000510860 516 ntBASIC14.87□□□□□ -0.03
CCL1P22362 AP002490.2-201ENST00000524791 560 ntBASIC14.87□□□□□ -0.03
CCL1P22362 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.87□□□□□ -0.03
CCL1P22362 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCL1P22362 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CCL1P22362 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
CCL1P22362 AP002414.4-201ENST00000589764 1148 ntBASIC14.87□□□□□ -0.03
CCL1P22362 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.87□□□□□ -0.03
CCL1P22362 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.87□□□□□ -0.03
CCL1P22362 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.87□□□□□ -0.03
CCL1P22362 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL1P22362 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL1P22362 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCL1P22362 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL1P22362 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCL1P22362 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL1P22362 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.87□□□□□ -0.03
CCL1P22362 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCL1P22362 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.87□□□□□ -0.03
CCL1P22362 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCL1P22362 TUBB8P12-201ENST00000308911 1335 ntBASIC14.87□□□□□ -0.03
CCL1P22362 TUBB7P-202ENST00000428444 1305 ntBASIC14.87□□□□□ -0.03
CCL1P22362 TUBB8P7-204ENST00000567960 1332 ntBASIC14.87□□□□□ -0.03
CCL1P22362 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
CCL1P22362 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.87□□□□□ -0.03
CCL1P22362 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCL1P22362 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL1P22362 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CCL1P22362 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
CCL1P22362 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.86□□□□□ -0.03
CCL1P22362 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL1P22362 SIGLEC16-201ENST00000599858 1437 ntBASIC14.86□□□□□ -0.03
CCL1P22362 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL1P22362 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CCL1P22362 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms