Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 LYSMD4-203ENST00000378904 2122 ntBASIC15.6■□□□□ 0.09
HLA-DPB1P04440 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 AC092597.1-201ENST00000487352 616 ntBASIC15.6■□□□□ 0.09
HLA-DPB1P04440 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.6■□□□□ 0.09
HLA-DPB1P04440 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 PVRIG2P-201ENST00000435460 978 ntBASIC15.59■□□□□ 0.09
HLA-DPB1P04440 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 AC112907.2-201ENST00000448639 330 ntBASIC15.59■□□□□ 0.09
HLA-DPB1P04440 HOMER2P1-201ENST00000455653 964 ntBASIC15.59■□□□□ 0.09
HLA-DPB1P04440 AC063952.2-201ENST00000498792 1227 ntBASIC15.59■□□□□ 0.09
HLA-DPB1P04440 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 AC022616.7-201ENST00000525383 220 ntBASIC15.59■□□□□ 0.09
HLA-DPB1P04440 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.59■□□□□ 0.09
HLA-DPB1P04440 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.58■□□□□ 0.09
HLA-DPB1P04440 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
HLA-DPB1P04440 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HLA-DPB1P04440 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
HLA-DPB1P04440 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
HLA-DPB1P04440 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HLA-DPB1P04440 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HLA-DPB1P04440 PKD1P5-201ENST00000532415 10291 ntBASIC15.58■□□□□ 0.09
HLA-DPB1P04440 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.58■□□□□ 0.09
HLA-DPB1P04440 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HLA-DPB1P04440 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
HLA-DPB1P04440 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DPB1P04440 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
HLA-DPB1P04440 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DPB1P04440 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DPB1P04440 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DPB1P04440 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
HLA-DPB1P04440 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms