Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.99■□□□□ 0.79
COL2A1P02458 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL2A1P02458 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL2A1P02458 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL2A1P02458 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
COL2A1P02458 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL2A1P02458 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL2A1P02458 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.99■□□□□ 0.79
COL2A1P02458 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL2A1P02458 AC005237.2-201ENST00000434368 219 ntBASIC19.99■□□□□ 0.79
COL2A1P02458 BCRP1-201ENST00000444246 691 ntBASIC19.99■□□□□ 0.79
COL2A1P02458 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
COL2A1P02458 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.99■□□□□ 0.79
COL2A1P02458 KRT8P49-201ENST00000604166 1432 ntBASIC19.99■□□□□ 0.79
COL2A1P02458 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.99■□□□□ 0.79
COL2A1P02458 AL096865.1-201ENST00000606796 927 ntBASIC19.99■□□□□ 0.79
COL2A1P02458 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.99■□□□□ 0.79
COL2A1P02458 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL2A1P02458 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL2A1P02458 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL2A1P02458 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL2A1P02458 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.98■□□□□ 0.79
COL2A1P02458 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL2A1P02458 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL2A1P02458 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL2A1P02458 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
COL2A1P02458 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.98■□□□□ 0.79
COL2A1P02458 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL2A1P02458 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL2A1P02458 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.98■□□□□ 0.79
COL2A1P02458 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL2A1P02458 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.98■□□□□ 0.79
COL2A1P02458 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.98■□□□□ 0.79
COL2A1P02458 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.98■□□□□ 0.79
COL2A1P02458 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.98■□□□□ 0.79
COL2A1P02458 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.98■□□□□ 0.79
COL2A1P02458 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.98■□□□□ 0.79
COL2A1P02458 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.98■□□□□ 0.79
COL2A1P02458 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.98■□□□□ 0.79
COL2A1P02458 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL2A1P02458 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL2A1P02458 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.97■□□□□ 0.79
COL2A1P02458 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL2A1P02458 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
COL2A1P02458 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL2A1P02458 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL2A1P02458 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.97■□□□□ 0.79
COL2A1P02458 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
COL2A1P02458 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL2A1P02458 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL2A1P02458 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL2A1P02458 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL2A1P02458 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
COL2A1P02458 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.97■□□□□ 0.79
COL2A1P02458 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
COL2A1P02458 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.97■□□□□ 0.79
COL2A1P02458 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL2A1P02458 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL2A1P02458 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL2A1P02458 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
COL2A1P02458 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
COL2A1P02458 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL2A1P02458 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.97■□□□□ 0.79
COL2A1P02458 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
COL2A1P02458 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.97■□□□□ 0.79
COL2A1P02458 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL2A1P02458 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
COL2A1P02458 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.96■□□□□ 0.79
COL2A1P02458 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.96■□□□□ 0.79
COL2A1P02458 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL2A1P02458 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL2A1P02458 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL2A1P02458 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL2A1P02458 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL2A1P02458 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL2A1P02458 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.96■□□□□ 0.79
COL2A1P02458 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
COL2A1P02458 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL2A1P02458 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL2A1P02458 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL2A1P02458 AC131009.4-201ENST00000624048 1740 ntBASIC19.96■□□□□ 0.79
COL2A1P02458 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.96■□□□□ 0.79
COL2A1P02458 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL2A1P02458 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.96■□□□□ 0.79
COL2A1P02458 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL2A1P02458 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.96■□□□□ 0.79
COL2A1P02458 SPDYE14P-201ENST00000442619 822 ntBASIC19.96■□□□□ 0.79
COL2A1P02458 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
COL2A1P02458 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.96■□□□□ 0.79
COL2A1P02458 MIR4492-201ENST00000581627 80 ntBASIC19.96■□□□□ 0.79
COL2A1P02458 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL2A1P02458 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.96■□□□□ 0.79
COL2A1P02458 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
COL2A1P02458 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL2A1P02458 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL2A1P02458 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.96■□□□□ 0.79
COL2A1P02458 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.96■□□□□ 0.79
COL2A1P02458 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL2A1P02458 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.96■□□□□ 0.79
COL2A1P02458 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms