Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.39□□□□□ -0.27
TRBV12-3P01733 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TRBV12-3P01733 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV12-3P01733 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV12-3P01733 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV12-3P01733 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV12-3P01733 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV12-3P01733 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV12-3P01733 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV12-3P01733 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV12-3P01733 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV12-3P01733 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV12-3P01733 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV12-3P01733 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRBV12-3P01733 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV12-3P01733 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV12-3P01733 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV12-3P01733 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV12-3P01733 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV12-3P01733 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV12-3P01733 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRBV12-3P01733 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.38□□□□□ -0.27
TRBV12-3P01733 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TRBV12-3P01733 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRBV12-3P01733 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV12-3P01733 RPS2P1-201ENST00000434010 821 ntBASIC13.38□□□□□ -0.27
TRBV12-3P01733 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRBV12-3P01733 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.38□□□□□ -0.27
TRBV12-3P01733 RNPS1P1-201ENST00000507437 918 ntBASIC13.38□□□□□ -0.27
TRBV12-3P01733 AC073648.2-201ENST00000510116 352 ntBASIC13.38□□□□□ -0.27
TRBV12-3P01733 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV12-3P01733 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.38□□□□□ -0.27
TRBV12-3P01733 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV12-3P01733 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.38□□□□□ -0.27
TRBV12-3P01733 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV12-3P01733 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC13.38□□□□□ -0.27
TRBV12-3P01733 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV12-3P01733 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRBV12-3P01733 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
TRBV12-3P01733 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV12-3P01733 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV12-3P01733 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV12-3P01733 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV12-3P01733 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV12-3P01733 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRBV12-3P01733 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
TRBV12-3P01733 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV12-3P01733 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV12-3P01733 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TRBV12-3P01733 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV12-3P01733 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TRBV12-3P01733 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV12-3P01733 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV12-3P01733 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV12-3P01733 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV12-3P01733 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV12-3P01733 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV12-3P01733 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.37□□□□□ -0.27
TRBV12-3P01733 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.37□□□□□ -0.27
TRBV12-3P01733 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV12-3P01733 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRBV12-3P01733 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TRBV12-3P01733 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV12-3P01733 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV12-3P01733 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV12-3P01733 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV12-3P01733 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV12-3P01733 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV12-3P01733 SLC25A1P3-201ENST00000395415 828 ntBASIC13.37□□□□□ -0.27
TRBV12-3P01733 MRPL3P1-201ENST00000400109 1033 ntBASIC13.37□□□□□ -0.27
TRBV12-3P01733 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV12-3P01733 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.37□□□□□ -0.27
TRBV12-3P01733 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.37□□□□□ -0.27
TRBV12-3P01733 HNRNPDP1-201ENST00000439535 754 ntBASIC13.37□□□□□ -0.27
TRBV12-3P01733 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.37□□□□□ -0.27
TRBV12-3P01733 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
TRBV12-3P01733 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV12-3P01733 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV12-3P01733 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
TRBV12-3P01733 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
TRBV12-3P01733 AL160237.2-201ENST00000556165 472 ntBASIC13.37□□□□□ -0.27
TRBV12-3P01733 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.37□□□□□ -0.27
TRBV12-3P01733 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.37□□□□□ -0.27
TRBV12-3P01733 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRBV12-3P01733 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV12-3P01733 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV12-3P01733 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV12-3P01733 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV12-3P01733 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV12-3P01733 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV12-3P01733 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.37□□□□□ -0.27
TRBV12-3P01733 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV12-3P01733 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV12-3P01733 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV12-3P01733 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRBV12-3P01733 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRBV12-3P01733 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV12-3P01733 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRBV12-3P01733 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.36□□□□□ -0.27
TRBV12-3P01733 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms