Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.55□□□□□ -0.24
ZNF253O75346 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
ZNF253O75346 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.54□□□□□ -0.24
ZNF253O75346 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ZNF253O75346 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ZNF253O75346 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.54□□□□□ -0.24
ZNF253O75346 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ZNF253O75346 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 HMGA1P5-201ENST00000412453 271 ntBASIC13.54□□□□□ -0.24
ZNF253O75346 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.54□□□□□ -0.24
ZNF253O75346 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC13.54□□□□□ -0.24
ZNF253O75346 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 AC008550.1-201ENST00000511500 884 ntBASIC13.54□□□□□ -0.24
ZNF253O75346 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC13.54□□□□□ -0.24
ZNF253O75346 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC13.54□□□□□ -0.24
ZNF253O75346 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.54□□□□□ -0.24
ZNF253O75346 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.54□□□□□ -0.24
ZNF253O75346 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
ZNF253O75346 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.54□□□□□ -0.24
ZNF253O75346 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC13.54□□□□□ -0.24
ZNF253O75346 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.54□□□□□ -0.24
ZNF253O75346 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 MED29-202ENST00000594368 1471 ntTSL 2 BASIC13.54□□□□□ -0.24
ZNF253O75346 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.54□□□□□ -0.24
ZNF253O75346 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.54□□□□□ -0.24
ZNF253O75346 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ZNF253O75346 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ZNF253O75346 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF253O75346 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.54□□□□□ -0.24
ZNF253O75346 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF253O75346 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF253O75346 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.53□□□□□ -0.24
ZNF253O75346 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF253O75346 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF253O75346 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF253O75346 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ZNF253O75346 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ZNF253O75346 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
ZNF253O75346 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
ZNF253O75346 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF253O75346 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF253O75346 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
ZNF253O75346 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF253O75346 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF253O75346 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF253O75346 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF253O75346 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF253O75346 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.53□□□□□ -0.24
ZNF253O75346 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF253O75346 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF253O75346 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF253O75346 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF253O75346 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF253O75346 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF253O75346 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
ZNF253O75346 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ZNF253O75346 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF253O75346 AGGF1P2-201ENST00000426656 2106 ntBASIC13.53□□□□□ -0.24
ZNF253O75346 TSPY7P-201ENST00000431358 1114 ntBASIC13.53□□□□□ -0.24
ZNF253O75346 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.53□□□□□ -0.24
ZNF253O75346 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF253O75346 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC13.53□□□□□ -0.24
ZNF253O75346 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF253O75346 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC13.53□□□□□ -0.24
ZNF253O75346 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC13.53□□□□□ -0.24
ZNF253O75346 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF253O75346 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF253O75346 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF253O75346 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.53□□□□□ -0.24
ZNF253O75346 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF253O75346 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF253O75346 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF253O75346 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ZNF253O75346 AC016396.2-201ENST00000562575 1417 ntBASIC13.53□□□□□ -0.24
ZNF253O75346 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms