Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PEX1O43933 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PEX1O43933 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PEX1O43933 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.93■□□□□ 0.3
PEX1O43933 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PEX1O43933 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PEX1O43933 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PEX1O43933 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PEX1O43933 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
PEX1O43933 HLA-F-220ENST00000434407 884 ntBASIC16.93■□□□□ 0.3
PEX1O43933 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.93■□□□□ 0.3
PEX1O43933 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.93■□□□□ 0.3
PEX1O43933 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
PEX1O43933 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.93■□□□□ 0.3
PEX1O43933 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.93■□□□□ 0.3
PEX1O43933 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PEX1O43933 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.93■□□□□ 0.3
PEX1O43933 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.93■□□□□ 0.3
PEX1O43933 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PEX1O43933 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PEX1O43933 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PEX1O43933 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PEX1O43933 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.93■□□□□ 0.3
PEX1O43933 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PEX1O43933 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
PEX1O43933 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PEX1O43933 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PEX1O43933 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.93■□□□□ 0.3
PEX1O43933 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.93■□□□□ 0.3
PEX1O43933 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PEX1O43933 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
PEX1O43933 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PEX1O43933 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
PEX1O43933 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.93■□□□□ 0.3
PEX1O43933 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
PEX1O43933 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.92■□□□□ 0.3
PEX1O43933 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PEX1O43933 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PEX1O43933 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PEX1O43933 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PEX1O43933 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.92■□□□□ 0.3
PEX1O43933 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PEX1O43933 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PEX1O43933 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PEX1O43933 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PEX1O43933 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PEX1O43933 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.92■□□□□ 0.3
PEX1O43933 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PEX1O43933 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PEX1O43933 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.92■□□□□ 0.3
PEX1O43933 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PEX1O43933 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PEX1O43933 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PEX1O43933 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PEX1O43933 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.92■□□□□ 0.3
PEX1O43933 LINC00304-203ENST00000565008 1864 ntBASIC16.92■□□□□ 0.3
PEX1O43933 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PEX1O43933 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.92■□□□□ 0.3
PEX1O43933 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PEX1O43933 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PEX1O43933 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.92■□□□□ 0.3
PEX1O43933 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PEX1O43933 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PEX1O43933 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PEX1O43933 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PEX1O43933 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.92■□□□□ 0.3
PEX1O43933 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PEX1O43933 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PEX1O43933 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PEX1O43933 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PEX1O43933 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PEX1O43933 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PEX1O43933 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PEX1O43933 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PEX1O43933 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.91■□□□□ 0.3
PEX1O43933 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PEX1O43933 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.91■□□□□ 0.3
PEX1O43933 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.91■□□□□ 0.3
PEX1O43933 HCG4P8-203ENST00000443049 980 ntBASIC16.91■□□□□ 0.3
PEX1O43933 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PEX1O43933 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PEX1O43933 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.91■□□□□ 0.3
PEX1O43933 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.91■□□□□ 0.3
PEX1O43933 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.91■□□□□ 0.3
PEX1O43933 AC011498.5-201ENST00000592027 486 ntBASIC16.91■□□□□ 0.3
PEX1O43933 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PEX1O43933 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PEX1O43933 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PEX1O43933 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PEX1O43933 AC079328.2-201ENST00000561241 3354 ntBASIC16.91■□□□□ 0.3
PEX1O43933 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PEX1O43933 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
PEX1O43933 HLA-J-201ENST00000462773 1622 ntBASIC16.91■□□□□ 0.3
PEX1O43933 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PEX1O43933 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.91■□□□□ 0.3
PEX1O43933 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PEX1O43933 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.91■□□□□ 0.3
PEX1O43933 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PEX1O43933 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PEX1O43933 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms