Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF113AO15541 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF113AO15541 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.72■□□□□ 0.91
RNF113AO15541 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF113AO15541 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF113AO15541 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF113AO15541 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF113AO15541 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF113AO15541 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF113AO15541 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF113AO15541 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF113AO15541 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF113AO15541 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF113AO15541 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF113AO15541 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF113AO15541 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF113AO15541 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF113AO15541 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF113AO15541 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF113AO15541 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF113AO15541 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.71■□□□□ 0.91
RNF113AO15541 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF113AO15541 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RNF113AO15541 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF113AO15541 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF113AO15541 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF113AO15541 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF113AO15541 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF113AO15541 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF113AO15541 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF113AO15541 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF113AO15541 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
RNF113AO15541 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.7■□□□□ 0.91
RNF113AO15541 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF113AO15541 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF113AO15541 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF113AO15541 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF113AO15541 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF113AO15541 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RNF113AO15541 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.7■□□□□ 0.9
RNF113AO15541 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF113AO15541 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF113AO15541 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF113AO15541 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF113AO15541 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.7■□□□□ 0.9
RNF113AO15541 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF113AO15541 UNC93B6-202ENST00000528242 690 ntBASIC20.7■□□□□ 0.9
RNF113AO15541 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.7■□□□□ 0.9
RNF113AO15541 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.7■□□□□ 0.9
RNF113AO15541 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.7■□□□□ 0.9
RNF113AO15541 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF113AO15541 AC008667.4-201ENST00000607370 168 ntBASIC20.7■□□□□ 0.9
RNF113AO15541 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
RNF113AO15541 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF113AO15541 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF113AO15541 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.7■□□□□ 0.9
RNF113AO15541 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF113AO15541 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF113AO15541 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF113AO15541 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF113AO15541 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF113AO15541 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF113AO15541 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF113AO15541 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF113AO15541 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF113AO15541 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF113AO15541 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF113AO15541 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF113AO15541 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF113AO15541 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF113AO15541 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF113AO15541 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF113AO15541 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF113AO15541 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF113AO15541 RNA5SP415-201ENST00000517246 115 ntBASIC20.69■□□□□ 0.9
RNF113AO15541 IGHV3-65-201ENST00000523210 341 ntBASIC20.69■□□□□ 0.9
RNF113AO15541 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.69■□□□□ 0.9
RNF113AO15541 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.69■□□□□ 0.9
RNF113AO15541 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
RNF113AO15541 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RNF113AO15541 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF113AO15541 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF113AO15541 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
RNF113AO15541 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RNF113AO15541 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF113AO15541 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF113AO15541 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RNF113AO15541 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF113AO15541 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF113AO15541 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF113AO15541 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF113AO15541 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF113AO15541 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF113AO15541 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF113AO15541 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF113AO15541 PAWRP1-201ENST00000451083 565 ntBASIC20.68■□□□□ 0.9
RNF113AO15541 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF113AO15541 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF113AO15541 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF113AO15541 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms