Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX1O00570 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX1O00570 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX1O00570 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX1O00570 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SOX1O00570 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX1O00570 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SOX1O00570 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
SOX1O00570 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.22■□□□□ 0.51
SOX1O00570 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.22■□□□□ 0.51
SOX1O00570 AC109635.5-201ENST00000533593 962 ntBASIC18.22■□□□□ 0.51
SOX1O00570 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC18.22■□□□□ 0.51
SOX1O00570 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC18.22■□□□□ 0.51
SOX1O00570 AL138918.1-201ENST00000568306 659 ntBASIC18.22■□□□□ 0.51
SOX1O00570 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.22■□□□□ 0.51
SOX1O00570 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SOX1O00570 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SOX1O00570 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SOX1O00570 ESPNP-201ENST00000270691 2015 ntBASIC18.22■□□□□ 0.51
SOX1O00570 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.22■□□□□ 0.51
SOX1O00570 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SOX1O00570 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.22■□□□□ 0.51
SOX1O00570 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.21■□□□□ 0.51
SOX1O00570 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX1O00570 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
SOX1O00570 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SOX1O00570 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX1O00570 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX1O00570 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
SOX1O00570 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SOX1O00570 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SOX1O00570 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.21■□□□□ 0.51
SOX1O00570 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX1O00570 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.21■□□□□ 0.51
SOX1O00570 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SOX1O00570 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.21■□□□□ 0.51
SOX1O00570 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX1O00570 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SOX1O00570 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX1O00570 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX1O00570 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SOX1O00570 AP3S2-216ENST00000617003 1561 ntBASIC18.21■□□□□ 0.51
SOX1O00570 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX1O00570 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX1O00570 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SOX1O00570 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.2■□□□□ 0.5
SOX1O00570 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX1O00570 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX1O00570 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SOX1O00570 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SOX1O00570 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.2■□□□□ 0.5
SOX1O00570 RPL37AP1-201ENST00000412502 279 ntBASIC18.2■□□□□ 0.5
SOX1O00570 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SOX1O00570 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SOX1O00570 AC108725.1-201ENST00000495472 409 ntBASIC18.2■□□□□ 0.5
SOX1O00570 DOC2GP-202ENST00000514950 1163 ntBASIC18.2■□□□□ 0.5
SOX1O00570 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.2■□□□□ 0.5
SOX1O00570 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.2■□□□□ 0.5
SOX1O00570 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.2■□□□□ 0.5
SOX1O00570 FOS-206ENST00000555347 1280 ntTSL 2 BASIC18.2■□□□□ 0.5
SOX1O00570 MIR3615-201ENST00000581999 87 ntBASIC18.2■□□□□ 0.5
SOX1O00570 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
SOX1O00570 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.2■□□□□ 0.5
SOX1O00570 SNX1-214ENST00000625244 324 ntTSL 5 BASIC18.2■□□□□ 0.5
SOX1O00570 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SOX1O00570 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SOX1O00570 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX1O00570 AL049812.1-201ENST00000432563 2267 ntBASIC18.2■□□□□ 0.5
SOX1O00570 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX1O00570 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX1O00570 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX1O00570 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
SOX1O00570 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX1O00570 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX1O00570 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SOX1O00570 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX1O00570 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SOX1O00570 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.19■□□□□ 0.5
SOX1O00570 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SOX1O00570 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.19■□□□□ 0.5
SOX1O00570 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX1O00570 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX1O00570 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SOX1O00570 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX1O00570 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX1O00570 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX1O00570 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SOX1O00570 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SOX1O00570 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX1O00570 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.19■□□□□ 0.5
SOX1O00570 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SOX1O00570 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.19■□□□□ 0.5
SOX1O00570 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX1O00570 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX1O00570 MIR663B-201ENST00000408361 115 ntBASIC18.19■□□□□ 0.5
SOX1O00570 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SOX1O00570 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.19■□□□□ 0.5
SOX1O00570 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SOX1O00570 AC093004.1-201ENST00000508850 424 ntBASIC18.19■□□□□ 0.5
SOX1O00570 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms