Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TBC1D3FA6NER0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 DNAJB3-202ENST00000449667 1266 ntBASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 MIR4469-201ENST00000583919 79 ntBASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 AL596442.2-201ENST00000610240 980 ntBASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.21■□□□□ 0.35
TBC1D3FA6NER0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TBC1D3FA6NER0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
TBC1D3FA6NER0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.21■□□□□ 0.34
TBC1D3FA6NER0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 HTR5BP-201ENST00000430851 1154 ntBASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 ALG1L5P-201ENST00000482043 771 ntBASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 AC025580.3-201ENST00000617932 1424 ntBASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TBC1D3FA6NER0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 RHOQP3-201ENST00000437982 621 ntBASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 CXCL1P1-201ENST00000502804 216 ntBASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 KRT19P2-202ENST00000557173 1012 ntBASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 SNHG9-202ENST00000564014 471 ntBASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 AC023141.13-201ENST00000604991 943 ntBASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 AL078644.1-201ENST00000609881 752 ntBASIC17.19■□□□□ 0.34
TBC1D3FA6NER0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms