Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PFDN4Q9NQP4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PFDN4Q9NQP4 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PFDN4Q9NQP4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PFDN4Q9NQP4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.13■□□□□ 0.33
PFDN4Q9NQP4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 AK4P3-201ENST00000418260 669 ntBASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 AC117947.1-201ENST00000427448 529 ntBASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 AC112698.1-201ENST00000510299 916 ntBASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 AL136038.4-201ENST00000603606 1261 ntBASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PFDN4Q9NQP4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PFDN4Q9NQP4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 AL359075.1-203ENST00000462729 1002 ntBASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 AL391807.1-203ENST00000604392 2365 ntBASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PFDN4Q9NQP4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms