Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC009154.2-201ENST00000621177 724 ntBASIC18.27■□□□□ 0.52
CD248Q9HCU0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CD248Q9HCU0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD248Q9HCU0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CD248Q9HCU0 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CD248Q9HCU0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CD248Q9HCU0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.27■□□□□ 0.51
CD248Q9HCU0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CD248Q9HCU0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.27■□□□□ 0.51
CD248Q9HCU0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.27■□□□□ 0.51
CD248Q9HCU0 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CD248Q9HCU0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CD248Q9HCU0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD248Q9HCU0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.26■□□□□ 0.51
CD248Q9HCU0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD248Q9HCU0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.26■□□□□ 0.51
CD248Q9HCU0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CD248Q9HCU0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CD248Q9HCU0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD248Q9HCU0 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CD248Q9HCU0 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD248Q9HCU0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD248Q9HCU0 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.26■□□□□ 0.51
CD248Q9HCU0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CD248Q9HCU0 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD248Q9HCU0 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD248Q9HCU0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD248Q9HCU0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD248Q9HCU0 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.26■□□□□ 0.51
CD248Q9HCU0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.26■□□□□ 0.51
CD248Q9HCU0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CD248Q9HCU0 AL031284.1-201ENST00000419297 478 ntBASIC18.26■□□□□ 0.51
CD248Q9HCU0 MTCL1P1-201ENST00000446207 792 ntBASIC18.26■□□□□ 0.51
CD248Q9HCU0 FGFR3P6-201ENST00000457012 610 ntBASIC18.26■□□□□ 0.51
CD248Q9HCU0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.26■□□□□ 0.51
CD248Q9HCU0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.26■□□□□ 0.51
CD248Q9HCU0 AL355877.3-201ENST00000622820 899 ntBASIC18.26■□□□□ 0.51
CD248Q9HCU0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD248Q9HCU0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CD248Q9HCU0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CD248Q9HCU0 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD248Q9HCU0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD248Q9HCU0 PCDHA1-201ENST00000378133 2726 ntBASIC18.26■□□□□ 0.51
CD248Q9HCU0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.26■□□□□ 0.51
CD248Q9HCU0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.26■□□□□ 0.51
CD248Q9HCU0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CD248Q9HCU0 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CD248Q9HCU0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CD248Q9HCU0 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD248Q9HCU0 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD248Q9HCU0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CD248Q9HCU0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CD248Q9HCU0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CD248Q9HCU0 IL9RP2-201ENST00000423948 1312 ntBASIC18.25■□□□□ 0.51
CD248Q9HCU0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD248Q9HCU0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CD248Q9HCU0 INTS4P1-201ENST00000438455 1935 ntBASIC18.25■□□□□ 0.51
CD248Q9HCU0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CD248Q9HCU0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CD248Q9HCU0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.25■□□□□ 0.51
CD248Q9HCU0 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CD248Q9HCU0 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD248Q9HCU0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD248Q9HCU0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD248Q9HCU0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD248Q9HCU0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
CD248Q9HCU0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD248Q9HCU0 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD248Q9HCU0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.25■□□□□ 0.51
CD248Q9HCU0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD248Q9HCU0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD248Q9HCU0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CD248Q9HCU0 AC008608.2-201ENST00000606089 416 ntBASIC18.25■□□□□ 0.51
CD248Q9HCU0 AC006538.3-201ENST00000612495 578 ntBASIC18.25■□□□□ 0.51
CD248Q9HCU0 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CD248Q9HCU0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CD248Q9HCU0 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.25■□□□□ 0.51
CD248Q9HCU0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD248Q9HCU0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.25■□□□□ 0.51
CD248Q9HCU0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD248Q9HCU0 AP001094.4-201ENST00000579008 2176 ntBASIC18.25■□□□□ 0.51
CD248Q9HCU0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.25■□□□□ 0.51
CD248Q9HCU0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.25■□□□□ 0.51
CD248Q9HCU0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CD248Q9HCU0 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CD248Q9HCU0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.25■□□□□ 0.51
CD248Q9HCU0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD248Q9HCU0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD248Q9HCU0 AC125634.1-201ENST00000438758 1403 ntBASIC18.24■□□□□ 0.51
CD248Q9HCU0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD248Q9HCU0 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD248Q9HCU0 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD248Q9HCU0 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD248Q9HCU0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD248Q9HCU0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD248Q9HCU0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD248Q9HCU0 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CD248Q9HCU0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.24■□□□□ 0.51
CD248Q9HCU0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD248Q9HCU0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms