Protein–RNA interactions for Protein: Q9BQJ4

TMEM47, Transmembrane protein 47, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47Q9BQJ4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM47Q9BQJ4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
TMEM47Q9BQJ4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.06■□□□□ 0.8
TMEM47Q9BQJ4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.06■□□□□ 0.8
TMEM47Q9BQJ4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.06■□□□□ 0.8
TMEM47Q9BQJ4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM47Q9BQJ4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.06■□□□□ 0.8
TMEM47Q9BQJ4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.06■□□□□ 0.8
TMEM47Q9BQJ4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.06■□□□□ 0.8
TMEM47Q9BQJ4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.06■□□□□ 0.8
TMEM47Q9BQJ4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM47Q9BQJ4 AC023511.2-201ENST00000618803 211 ntBASIC20.06■□□□□ 0.8
TMEM47Q9BQJ4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TMEM47Q9BQJ4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM47Q9BQJ4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.06■□□□□ 0.8
TMEM47Q9BQJ4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM47Q9BQJ4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM47Q9BQJ4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 SLC25A6P2-201ENST00000497974 877 ntBASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM47Q9BQJ4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM47Q9BQJ4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM47Q9BQJ4 EGFEM1P-202ENST00000431685 1563 ntBASIC20.04■□□□□ 0.8
TMEM47Q9BQJ4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.04■□□□□ 0.8
TMEM47Q9BQJ4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM47Q9BQJ4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.04■□□□□ 0.8
TMEM47Q9BQJ4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM47Q9BQJ4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM47Q9BQJ4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM47Q9BQJ4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM47Q9BQJ4 AC087163.2-201ENST00000457299 853 ntBASIC20.04■□□□□ 0.8
TMEM47Q9BQJ4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.04■□□□□ 0.8
TMEM47Q9BQJ4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.04■□□□□ 0.8
TMEM47Q9BQJ4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.04■□□□□ 0.8
TMEM47Q9BQJ4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.04■□□□□ 0.8
TMEM47Q9BQJ4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM47Q9BQJ4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM47Q9BQJ4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM47Q9BQJ4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 AC018845.2-201ENST00000568326 409 ntBASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TMEM47Q9BQJ4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM47Q9BQJ4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM47Q9BQJ4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms