Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 KRT8P26-201ENST00000534154 1276 ntBASIC17.33■□□□□ 0.36
CPNE1Q99829 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE1Q99829 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.33■□□□□ 0.36
CPNE1Q99829 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CPNE1Q99829 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE1Q99829 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE1Q99829 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE1Q99829 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE1Q99829 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE1Q99829 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE1Q99829 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE1Q99829 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE1Q99829 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.33■□□□□ 0.36
CPNE1Q99829 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE1Q99829 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.33■□□□□ 0.36
CPNE1Q99829 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CPNE1Q99829 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CPNE1Q99829 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE1Q99829 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE1Q99829 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE1Q99829 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE1Q99829 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE1Q99829 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE1Q99829 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE1Q99829 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CPNE1Q99829 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.32■□□□□ 0.36
CPNE1Q99829 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.32■□□□□ 0.36
CPNE1Q99829 TNRC18P3-201ENST00000441896 2691 ntBASIC17.32■□□□□ 0.36
CPNE1Q99829 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.32■□□□□ 0.36
CPNE1Q99829 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CPNE1Q99829 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE1Q99829 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE1Q99829 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.32■□□□□ 0.36
CPNE1Q99829 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE1Q99829 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
CPNE1Q99829 DUX4L26-201ENST00000489078 1255 ntBASIC17.32■□□□□ 0.36
CPNE1Q99829 AC009533.2-201ENST00000543664 586 ntBASIC17.32■□□□□ 0.36
CPNE1Q99829 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.32■□□□□ 0.36
CPNE1Q99829 AL136038.3-201ENST00000561909 1096 ntBASIC17.32■□□□□ 0.36
CPNE1Q99829 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.32■□□□□ 0.36
CPNE1Q99829 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CPNE1Q99829 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE1Q99829 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE1Q99829 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE1Q99829 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CPNE1Q99829 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CPNE1Q99829 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE1Q99829 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE1Q99829 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.32■□□□□ 0.36
CPNE1Q99829 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE1Q99829 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CPNE1Q99829 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE1Q99829 AC009336.1-201ENST00000608941 1553 ntBASIC17.32■□□□□ 0.36
CPNE1Q99829 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
CPNE1Q99829 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.32■□□□□ 0.36
CPNE1Q99829 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE1Q99829 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.32■□□□□ 0.36
CPNE1Q99829 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE1Q99829 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE1Q99829 AC092068.3-201ENST00000587894 2016 ntBASIC17.31■□□□□ 0.36
CPNE1Q99829 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE1Q99829 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE1Q99829 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CPNE1Q99829 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE1Q99829 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE1Q99829 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE1Q99829 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE1Q99829 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE1Q99829 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CPNE1Q99829 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
CPNE1Q99829 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
CPNE1Q99829 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.31■□□□□ 0.36
CPNE1Q99829 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE1Q99829 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE1Q99829 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE1Q99829 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CPNE1Q99829 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CPNE1Q99829 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.31■□□□□ 0.36
CPNE1Q99829 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.31■□□□□ 0.36
CPNE1Q99829 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.31■□□□□ 0.36
CPNE1Q99829 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CPNE1Q99829 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.31■□□□□ 0.36
CPNE1Q99829 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.31■□□□□ 0.36
CPNE1Q99829 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.31■□□□□ 0.36
CPNE1Q99829 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.31■□□□□ 0.36
CPNE1Q99829 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CPNE1Q99829 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CPNE1Q99829 AL135999.2-201ENST00000622438 1686 ntBASIC17.31■□□□□ 0.36
CPNE1Q99829 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CPNE1Q99829 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE1Q99829 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE1Q99829 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
CPNE1Q99829 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE1Q99829 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE1Q99829 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE1Q99829 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CPNE1Q99829 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE1Q99829 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CPNE1Q99829 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CPNE1Q99829 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms