Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.64■□□□□ 0.57
SNX27Q96L92 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SNX27Q96L92 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX27Q96L92 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.64■□□□□ 0.57
SNX27Q96L92 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNX27Q96L92 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.64■□□□□ 0.57
SNX27Q96L92 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.64■□□□□ 0.57
SNX27Q96L92 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX27Q96L92 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.64■□□□□ 0.57
SNX27Q96L92 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX27Q96L92 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.64■□□□□ 0.57
SNX27Q96L92 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX27Q96L92 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX27Q96L92 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SNX27Q96L92 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
SNX27Q96L92 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX27Q96L92 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNX27Q96L92 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SNX27Q96L92 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX27Q96L92 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
SNX27Q96L92 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SNX27Q96L92 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.63■□□□□ 0.57
SNX27Q96L92 CRYGEP-201ENST00000412192 528 ntBASIC18.63■□□□□ 0.57
SNX27Q96L92 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.63■□□□□ 0.57
SNX27Q96L92 HCG4B-203ENST00000450128 991 ntBASIC18.63■□□□□ 0.57
SNX27Q96L92 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.63■□□□□ 0.57
SNX27Q96L92 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
SNX27Q96L92 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.63■□□□□ 0.57
SNX27Q96L92 OR7E47P-204ENST00000575924 449 ntBASIC18.63■□□□□ 0.57
SNX27Q96L92 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.63■□□□□ 0.57
SNX27Q96L92 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.63■□□□□ 0.57
SNX27Q96L92 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
SNX27Q96L92 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX27Q96L92 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNX27Q96L92 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.63■□□□□ 0.57
SNX27Q96L92 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.63■□□□□ 0.57
SNX27Q96L92 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNX27Q96L92 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX27Q96L92 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNX27Q96L92 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.62■□□□□ 0.57
SNX27Q96L92 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.62■□□□□ 0.57
SNX27Q96L92 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
SNX27Q96L92 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SNX27Q96L92 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX27Q96L92 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
SNX27Q96L92 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SNX27Q96L92 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SNX27Q96L92 IGLL3P-201ENST00000412472 434 ntBASIC18.62■□□□□ 0.57
SNX27Q96L92 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.62■□□□□ 0.57
SNX27Q96L92 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.62■□□□□ 0.57
SNX27Q96L92 AC112482.1-201ENST00000492080 688 ntBASIC18.62■□□□□ 0.57
SNX27Q96L92 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.62■□□□□ 0.57
SNX27Q96L92 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
SNX27Q96L92 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.62■□□□□ 0.57
SNX27Q96L92 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNX27Q96L92 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.62■□□□□ 0.57
SNX27Q96L92 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
SNX27Q96L92 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX27Q96L92 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX27Q96L92 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.62■□□□□ 0.57
SNX27Q96L92 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX27Q96L92 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SNX27Q96L92 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.62■□□□□ 0.57
SNX27Q96L92 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX27Q96L92 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.62■□□□□ 0.57
SNX27Q96L92 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.62■□□□□ 0.57
SNX27Q96L92 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.62■□□□□ 0.57
SNX27Q96L92 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNX27Q96L92 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX27Q96L92 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX27Q96L92 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX27Q96L92 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNX27Q96L92 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNX27Q96L92 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.61■□□□□ 0.57
SNX27Q96L92 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.61■□□□□ 0.57
SNX27Q96L92 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNX27Q96L92 AL133373.2-201ENST00000623187 2828 ntBASIC18.61■□□□□ 0.57
SNX27Q96L92 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNX27Q96L92 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNX27Q96L92 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SNX27Q96L92 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNX27Q96L92 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNX27Q96L92 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SNX27Q96L92 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SNX27Q96L92 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SNX27Q96L92 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNX27Q96L92 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.61■□□□□ 0.57
SNX27Q96L92 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SNX27Q96L92 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.61■□□□□ 0.57
SNX27Q96L92 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SNX27Q96L92 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNX27Q96L92 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNX27Q96L92 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNX27Q96L92 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.61■□□□□ 0.57
SNX27Q96L92 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNX27Q96L92 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SNX27Q96L92 KRT18P2-201ENST00000447938 1258 ntBASIC18.61■□□□□ 0.57
SNX27Q96L92 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNX27Q96L92 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.61■□□□□ 0.57
SNX27Q96L92 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms