Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
BEST4Q8NFU0 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BEST4Q8NFU0 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BEST4Q8NFU0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.02■□□□□ -0
BEST4Q8NFU0 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BEST4Q8NFU0 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.02■□□□□ -0
BEST4Q8NFU0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BEST4Q8NFU0 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
BEST4Q8NFU0 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
BEST4Q8NFU0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BEST4Q8NFU0 SLC25A1P2-201ENST00000430693 912 ntBASIC15.02■□□□□ -0
BEST4Q8NFU0 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.02■□□□□ -0
BEST4Q8NFU0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.02■□□□□ -0
BEST4Q8NFU0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.02■□□□□ -0
BEST4Q8NFU0 AL353719.1-201ENST00000566847 864 ntBASIC15.02■□□□□ -0
BEST4Q8NFU0 AP005242.2-201ENST00000580065 1175 ntBASIC15.02■□□□□ -0
BEST4Q8NFU0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.02■□□□□ -0
BEST4Q8NFU0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.02■□□□□ -0
BEST4Q8NFU0 AL023803.3-201ENST00000615559 522 ntBASIC15.02■□□□□ -0
BEST4Q8NFU0 REXO1L10P-201ENST00000615707 1290 ntBASIC15.02■□□□□ -0
BEST4Q8NFU0 REXO1L12P-201ENST00000622156 912 ntBASIC15.02■□□□□ -0
BEST4Q8NFU0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
BEST4Q8NFU0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
BEST4Q8NFU0 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BEST4Q8NFU0 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.02□□□□□ -0.01
BEST4Q8NFU0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.02□□□□□ -0.01
BEST4Q8NFU0 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.02□□□□□ -0.01
BEST4Q8NFU0 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
BEST4Q8NFU0 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.02□□□□□ -0.01
BEST4Q8NFU0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
BEST4Q8NFU0 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BEST4Q8NFU0 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BEST4Q8NFU0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
BEST4Q8NFU0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BEST4Q8NFU0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BEST4Q8NFU0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
BEST4Q8NFU0 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BEST4Q8NFU0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.02□□□□□ -0.01
BEST4Q8NFU0 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
BEST4Q8NFU0 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
BEST4Q8NFU0 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15□□□□□ -0.01
BEST4Q8NFU0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15□□□□□ -0.01
BEST4Q8NFU0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
BEST4Q8NFU0 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BEST4Q8NFU0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15□□□□□ -0.01
BEST4Q8NFU0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15□□□□□ -0.01
BEST4Q8NFU0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
BEST4Q8NFU0 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15□□□□□ -0.01
BEST4Q8NFU0 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
BEST4Q8NFU0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15□□□□□ -0.01
BEST4Q8NFU0 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
BEST4Q8NFU0 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15□□□□□ -0.01
BEST4Q8NFU0 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms