Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
FAM78BQ5VT40 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 AC016396.2-201ENST00000562575 1417 ntBASIC13.81□□□□□ -0.2
FAM78BQ5VT40 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 PCDHB17P-201ENST00000539533 2393 ntBASIC13.81□□□□□ -0.2
FAM78BQ5VT40 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.81□□□□□ -0.2
FAM78BQ5VT40 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 DDX43P3-201ENST00000441064 443 ntBASIC13.81□□□□□ -0.2
FAM78BQ5VT40 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 AC093827.2-201ENST00000512654 315 ntBASIC13.81□□□□□ -0.2
FAM78BQ5VT40 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 AL353719.1-201ENST00000566847 864 ntBASIC13.81□□□□□ -0.2
FAM78BQ5VT40 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 AC116562.4-202ENST00000641738 218 ntBASIC13.81□□□□□ -0.2
FAM78BQ5VT40 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 LINC00167-201ENST00000530583 1419 ntBASIC13.81□□□□□ -0.2
FAM78BQ5VT40 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.81□□□□□ -0.2
FAM78BQ5VT40 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.8□□□□□ -0.2
FAM78BQ5VT40 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms